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Cluster: HRGMv2_0203_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0203_38 HRGMv2_0203_38_3 1918 4668 - 1.B.42.1.8
TC HRGMv2_0203_38 HRGMv2_0203_38_4 4984 6363 - 8.A.46.3.2
TC HRGMv2_0203_38 HRGMv2_0203_38_5 6393 9476 - 1.B.14.6.1
CAZyme HRGMv2_0203_38 HRGMv2_0203_38_6 9507 11822 - GH92
pfam HRGMv2_0203_38 HRGMv2_0203_38_7 11846 12649 - BSP
CAZyme HRGMv2_0203_38 HRGMv2_0203_38_8 12670 15045 - GH92
TF HRGMv2_0203_38 HRGMv2_0203_38_9 15274 18210 - HTH_AraC
STP HRGMv2_0203_38 HRGMv2_0203_38_10 18269 18805 - HD
CAZyme HRGMv2_0203_38 HRGMv2_0203_38_11 18871 20034 + GH171
TC HRGMv2_0203_38 HRGMv2_0203_38_12 20125 21450 - 3.A.5.1.1
TC HRGMv2_0203_38 HRGMv2_0203_38_13 21520 22842 - 2.A.66.1.45
Gene ID: HRGMv2_0203_38_3
Type: TC
Location: 1918 - 4668 (-)
Gene ID: HRGMv2_0203_38_4
Type: TC
Location: 4984 - 6363 (-)
Gene ID: HRGMv2_0203_38_5
Type: TC
Location: 6393 - 9476 (-)
Gene ID: HRGMv2_0203_38_6
Type: CAZyme
Location: 9507 - 11822 (-)
Gene ID: HRGMv2_0203_38_7
Type: pfam
Location: 11846 - 12649 (-)
Gene ID: HRGMv2_0203_38_8
Type: CAZyme
Location: 12670 - 15045 (-)
Gene ID: HRGMv2_0203_38_9
Type: TF
Location: 15274 - 18210 (-)
Gene ID: HRGMv2_0203_38_10
Type: STP
Location: 18269 - 18805 (-)
Gene ID: HRGMv2_0203_38_11
Type: CAZyme
Location: 18871 - 20034 (+)
Gene ID: HRGMv2_0203_38_12
Type: TC
Location: 20125 - 21450 (-)
Gene ID: HRGMv2_0203_38_13
Type: TC
Location: 21520 - 22842 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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