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Cluster: HRGMv2_0203_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0203_31 HRGMv2_0203_31_3 6462 9287 - 1.C.105.2.12
NULL(UNKNOWN) HRGMv2_0203_31 HRGMv2_0203_31_4 9306 11396 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0203_31 HRGMv2_0203_31_5 11401 12657 - DUF1501
TC HRGMv2_0203_31 HRGMv2_0203_31_6 12671 14083 - 1.B.14.17.2
pfam HRGMv2_0203_31 HRGMv2_0203_31_7 14088 15209 - FkbO_Hyg5-like_N
CAZyme HRGMv2_0203_31 HRGMv2_0203_31_8 15336 17564 - GH2
sulfatase HRGMv2_0203_31 HRGMv2_0203_31_9 17567 19234 - S1_4
CAZyme HRGMv2_0203_31 HRGMv2_0203_31_10 19248 20375 - GH43
CAZyme HRGMv2_0203_31 HRGMv2_0203_31_11 20450 22531 - GH51_2
Gene ID: HRGMv2_0203_31_3
Type: TC
Location: 6462 - 9287 (-)
Gene ID: HRGMv2_0203_31_4
Type:
Location: 9306 - 11396 (-)
Gene ID: HRGMv2_0203_31_5
Type: pfam
Location: 11401 - 12657 (-)
Gene ID: HRGMv2_0203_31_6
Type: TC
Location: 12671 - 14083 (-)
Gene ID: HRGMv2_0203_31_7
Type: pfam
Location: 14088 - 15209 (-)
Gene ID: HRGMv2_0203_31_8
Type: CAZyme
Location: 15336 - 17564 (-)
Gene ID: HRGMv2_0203_31_9
Type: sulfatase
Location: 17567 - 19234 (-)
Gene ID: HRGMv2_0203_31_10
Type: CAZyme
Location: 19248 - 20375 (-)
Gene ID: HRGMv2_0203_31_11
Type: CAZyme
Location: 20450 - 22531 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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