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Cluster: HRGMv2_0203_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0203_19 HRGMv2_0203_19_8 11080 12366 - 2.A.40.7.6
pfam HRGMv2_0203_19 HRGMv2_0203_19_9 12380 13081 - DUF5020
CAZyme HRGMv2_0203_19 HRGMv2_0203_19_10 13240 15153 + GH29
STP HRGMv2_0203_19 HRGMv2_0203_19_11 15177 16403 + ACT
TC HRGMv2_0203_19 HRGMv2_0203_19_12 16682 17137 - 9.A.24.1.7
pfam HRGMv2_0203_19 HRGMv2_0203_19_13 17167 19356 - Gln-synt_C | GSIII_N | Gln-synt_C-ter
STP HRGMv2_0203_19 HRGMv2_0203_19_14 19446 20675 - Aminotran_1_2
TC HRGMv2_0203_19 HRGMv2_0203_19_15 20904 21791 + 2.A.115.1.1
Gene ID: HRGMv2_0203_19_8
Type: TC
Location: 11080 - 12366 (-)
Gene ID: HRGMv2_0203_19_9
Type: pfam
Location: 12380 - 13081 (-)
Gene ID: HRGMv2_0203_19_10
Type: CAZyme
Location: 13240 - 15153 (+)
Gene ID: HRGMv2_0203_19_11
Type: STP
Location: 15177 - 16403 (+)
Gene ID: HRGMv2_0203_19_12
Type: TC
Location: 16682 - 17137 (-)
Gene ID: HRGMv2_0203_19_13
Type: pfam
Location: 17167 - 19356 (-)
Gene ID: HRGMv2_0203_19_14
Type: STP
Location: 19446 - 20675 (-)
Gene ID: HRGMv2_0203_19_15
Type: TC
Location: 20904 - 21791 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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