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Cluster: HRGMv2_0203_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0203_9 HRGMv2_0203_9_11 18407 21430 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0203_9 HRGMv2_0203_9_12 21559 21648 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0203_9 HRGMv2_0203_9_13 21670 23532 - GH86
pfam HRGMv2_0203_9 HRGMv2_0203_9_14 23755 24249 + CBM_4_9
CAZyme HRGMv2_0203_9 HRGMv2_0203_9_15 24658 27126 + GH2
CAZyme HRGMv2_0203_9 HRGMv2_0203_9_16 27123 28910 + GH29
CAZyme HRGMv2_0203_9 HRGMv2_0203_9_17 29300 30688 + GH16_12
sulfatase HRGMv2_0203_9 HRGMv2_0203_9_18 30777 32390 + S1_11
sulfatase HRGMv2_0203_9 HRGMv2_0203_9_19 32421 34010 + S1_11
TC HRGMv2_0203_9 HRGMv2_0203_9_20 34387 37446 + 1.B.14.6.1
pfam HRGMv2_0203_9 HRGMv2_0203_9_21 37461 39296 + SusD_RagB | SusD-like_3
TC HRGMv2_0203_9 HRGMv2_0203_9_22 39312 42122 + 1.B.14.6.1
Gene ID: HRGMv2_0203_9_11
Type: TC
Location: 18407 - 21430 (-)
Gene ID: HRGMv2_0203_9_12
Type:
Location: 21559 - 21648 (-)
Gene ID: HRGMv2_0203_9_13
Type: CAZyme
Location: 21670 - 23532 (-)
Gene ID: HRGMv2_0203_9_14
Type: pfam
Location: 23755 - 24249 (+)
Gene ID: HRGMv2_0203_9_15
Type: CAZyme
Location: 24658 - 27126 (+)
Gene ID: HRGMv2_0203_9_16
Type: CAZyme
Location: 27123 - 28910 (+)
Gene ID: HRGMv2_0203_9_17
Type: CAZyme
Location: 29300 - 30688 (+)
Gene ID: HRGMv2_0203_9_18
Type: sulfatase
Location: 30777 - 32390 (+)
Gene ID: HRGMv2_0203_9_19
Type: sulfatase
Location: 32421 - 34010 (+)
Gene ID: HRGMv2_0203_9_20
Type: TC
Location: 34387 - 37446 (+)
Gene ID: HRGMv2_0203_9_21
Type: pfam
Location: 37461 - 39296 (+)
Gene ID: HRGMv2_0203_9_22
Type: TC
Location: 39312 - 42122 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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