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Cluster: HRGMv2_0203_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0203_7 HRGMv2_0203_7_7 9463 10989 - GH109
pfam HRGMv2_0203_7 HRGMv2_0203_7_8 11309 11536 + DUF2582
pfam HRGMv2_0203_7 HRGMv2_0203_7_9 11538 11759 + DUF2582
CAZyme HRGMv2_0203_7 HRGMv2_0203_7_10 11833 14214 - GH35
CAZyme HRGMv2_0203_7 HRGMv2_0203_7_11 14270 15244 - GH43_19
CAZyme HRGMv2_0203_7 HRGMv2_0203_7_12 15288 16844 - GH30_4
CAZyme HRGMv2_0203_7 HRGMv2_0203_7_13 16929 18548 - GH30_4
TC HRGMv2_0203_7 HRGMv2_0203_7_14 18574 20157 - 8.A.46.1.5
NULL(UNKNOWN) HRGMv2_0203_7 HRGMv2_0203_7_15 20175 22406 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0203_7 HRGMv2_0203_7_16 22375 23202 - 1.B.14.6.1
Gene ID: HRGMv2_0203_7_7
Type: CAZyme
Location: 9463 - 10989 (-)
Gene ID: HRGMv2_0203_7_8
Type: pfam
Location: 11309 - 11536 (+)
Gene ID: HRGMv2_0203_7_9
Type: pfam
Location: 11538 - 11759 (+)
Gene ID: HRGMv2_0203_7_10
Type: CAZyme
Location: 11833 - 14214 (-)
Gene ID: HRGMv2_0203_7_11
Type: CAZyme
Location: 14270 - 15244 (-)
Gene ID: HRGMv2_0203_7_12
Type: CAZyme
Location: 15288 - 16844 (-)
Gene ID: HRGMv2_0203_7_13
Type: CAZyme
Location: 16929 - 18548 (-)
Gene ID: HRGMv2_0203_7_14
Type: TC
Location: 18574 - 20157 (-)
Gene ID: HRGMv2_0203_7_15
Type:
Location: 20175 - 22406 (-)
Gene ID: HRGMv2_0203_7_16
Type: TC
Location: 22375 - 23202 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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