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Cluster: HRGMv2_0195_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0195_26 HRGMv2_0195_26_11 8924 9505 - 3.D.6.1.2
TC HRGMv2_0195_26 HRGMv2_0195_26_12 9569 10159 - 3.D.6.1.2
TC HRGMv2_0195_26 HRGMv2_0195_26_13 10169 11317 - 3.D.6.1.3
TC HRGMv2_0195_26 HRGMv2_0195_26_14 11314 12303 - 3.D.6.1.2
TC HRGMv2_0195_26 HRGMv2_0195_26_15 12356 13708 - 3.D.6.1.2
TC HRGMv2_0195_26 HRGMv2_0195_26_16 13718 14653 - 3.D.6.1.2
pfam HRGMv2_0195_26 HRGMv2_0195_26_17 14670 15104 - RseC_MucC
STP HRGMv2_0195_26 HRGMv2_0195_26_18 15221 16246 - Aminotran_1_2
CAZyme HRGMv2_0195_26 HRGMv2_0195_26_19 16289 17599 - GH3
Gene ID: HRGMv2_0195_26_11
Type: TC
Location: 8924 - 9505 (-)
Gene ID: HRGMv2_0195_26_12
Type: TC
Location: 9569 - 10159 (-)
Gene ID: HRGMv2_0195_26_13
Type: TC
Location: 10169 - 11317 (-)
Gene ID: HRGMv2_0195_26_14
Type: TC
Location: 11314 - 12303 (-)
Gene ID: HRGMv2_0195_26_15
Type: TC
Location: 12356 - 13708 (-)
Gene ID: HRGMv2_0195_26_16
Type: TC
Location: 13718 - 14653 (-)
Gene ID: HRGMv2_0195_26_17
Type: pfam
Location: 14670 - 15104 (-)
Gene ID: HRGMv2_0195_26_18
Type: STP
Location: 15221 - 16246 (-)
Gene ID: HRGMv2_0195_26_19
Type: CAZyme
Location: 16289 - 17599 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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