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Cluster: HRGMv2_0195_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0195_1 HRGMv2_0195_1_82 98457 99152 + 1.B.44.2.15
TC HRGMv2_0195_1 HRGMv2_0195_1_83 99418 101283 - 3.B.1.1.6
pfam HRGMv2_0195_1 HRGMv2_0195_1_84 101627 102733 - RF-1 | PCRF
pfam HRGMv2_0195_1 HRGMv2_0195_1_85 102766 103926 - AIRS | AIRS_C
CAZyme HRGMv2_0195_1 HRGMv2_0195_1_86 103969 104910 - GH73
pfam HRGMv2_0195_1 HRGMv2_0195_1_87 105531 107327 + S1 | S1 | S1 | S1 | S1 | S1 | S1_RRP5
TC HRGMv2_0195_1 HRGMv2_0195_1_88 107714 109402 + 9.B.174.1.1
TC HRGMv2_0195_1 HRGMv2_0195_1_89 109497 111176 + 2.A.81.1.2
Gene ID: HRGMv2_0195_1_82
Type: TC
Location: 98457 - 99152 (+)
Gene ID: HRGMv2_0195_1_83
Type: TC
Location: 99418 - 101283 (-)
Gene ID: HRGMv2_0195_1_84
Type: pfam
Location: 101627 - 102733 (-)
Gene ID: HRGMv2_0195_1_85
Type: pfam
Location: 102766 - 103926 (-)
Gene ID: HRGMv2_0195_1_86
Type: CAZyme
Location: 103969 - 104910 (-)
Gene ID: HRGMv2_0195_1_87
Type: pfam
Location: 105531 - 107327 (+)
Gene ID: HRGMv2_0195_1_88
Type: TC
Location: 107714 - 109402 (+)
Gene ID: HRGMv2_0195_1_89
Type: TC
Location: 109497 - 111176 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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