Cluster: HRGMv2_0190_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0190
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0190_17 | HRGMv2_0190_17_28 | 39667 | 42912 | + | 1.B.14.6.1 |
| TC | HRGMv2_0190_17 | HRGMv2_0190_17_29 | 42926 | 44428 | + | 8.A.46.1.4 |
| NULL(UNKNOWN) | HRGMv2_0190_17 | HRGMv2_0190_17_30 | 44661 | 46544 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0190_17 | HRGMv2_0190_17_31 | 46569 | 47690 | + | GH16_3 |
| pfam | HRGMv2_0190_17 | HRGMv2_0190_17_32 | 47695 | 49290 | + | CotH |
| CAZyme | HRGMv2_0190_17 | HRGMv2_0190_17_33 | 49291 | 51498 | + | GH3 |
Gene ID: HRGMv2_0190_17_28
Type: TC
Location: 39667 - 42912 (+)
Type: TC
Location: 39667 - 42912 (+)
Gene ID: HRGMv2_0190_17_29
Type: TC
Location: 42926 - 44428 (+)
Type: TC
Location: 42926 - 44428 (+)
Gene ID: HRGMv2_0190_17_30
Type:
Location: 44661 - 46544 (+)
Type:
Location: 44661 - 46544 (+)
Gene ID: HRGMv2_0190_17_31
Type: CAZyme
Location: 46569 - 47690 (+)
Type: CAZyme
Location: 46569 - 47690 (+)
Gene ID: HRGMv2_0190_17_32
Type: pfam
Location: 47695 - 49290 (+)
Type: pfam
Location: 47695 - 49290 (+)
Gene ID: HRGMv2_0190_17_33
Type: CAZyme
Location: 49291 - 51498 (+)
Type: CAZyme
Location: 49291 - 51498 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp900544195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.