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Cluster: HRGMv2_0190_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0190_1 HRGMv2_0190_1_11 12730 14598 + 2.A.9.3.2
pfam HRGMv2_0190_1 HRGMv2_0190_1_12 14629 15294 + Ala_racemase_N
TC HRGMv2_0190_1 HRGMv2_0190_1_13 15890 16621 - 9.B.186.1.3
pfam HRGMv2_0190_1 HRGMv2_0190_1_14 16750 17748 - Gp_dh_N | Gp_dh_C
pfam HRGMv2_0190_1 HRGMv2_0190_1_15 17885 18742 + SurE
CAZyme HRGMv2_0190_1 HRGMv2_0190_1_16 18815 19975 + GT19
NULL(UNKNOWN) HRGMv2_0190_1 HRGMv2_0190_1_17 20103 21209 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0190_1 HRGMv2_0190_1_18 21325 22209 - GH25
TC HRGMv2_0190_1 HRGMv2_0190_1_19 22261 23934 + 2.A.81.1.2
pfam HRGMv2_0190_1 HRGMv2_0190_1_20 24310 26793 + DUF285
NULL(UNKNOWN) HRGMv2_0190_1 HRGMv2_0190_1_21 27010 29277 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0190_1 HRGMv2_0190_1_22 29466 32249 - 3.A.3.2.17
Gene ID: HRGMv2_0190_1_11
Type: TC
Location: 12730 - 14598 (+)
Gene ID: HRGMv2_0190_1_12
Type: pfam
Location: 14629 - 15294 (+)
Gene ID: HRGMv2_0190_1_13
Type: TC
Location: 15890 - 16621 (-)
Gene ID: HRGMv2_0190_1_14
Type: pfam
Location: 16750 - 17748 (-)
Gene ID: HRGMv2_0190_1_15
Type: pfam
Location: 17885 - 18742 (+)
Gene ID: HRGMv2_0190_1_16
Type: CAZyme
Location: 18815 - 19975 (+)
Gene ID: HRGMv2_0190_1_17
Type:
Location: 20103 - 21209 (+)
Gene ID: HRGMv2_0190_1_18
Type: CAZyme
Location: 21325 - 22209 (-)
Gene ID: HRGMv2_0190_1_19
Type: TC
Location: 22261 - 23934 (+)
Gene ID: HRGMv2_0190_1_20
Type: pfam
Location: 24310 - 26793 (+)
Gene ID: HRGMv2_0190_1_21
Type:
Location: 27010 - 29277 (+)
Gene ID: HRGMv2_0190_1_22
Type: TC
Location: 29466 - 32249 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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