Cluster: HRGMv2_0188_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0188
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0188_3 | HRGMv2_0188_3_55 | 55309 | 57663 | - | GT51 |
| TC | HRGMv2_0188_3 | HRGMv2_0188_3_56 | 57770 | 60085 | + | 3.A.7.7.1 |
| TF | HRGMv2_0188_3 | HRGMv2_0188_3_57 | 60140 | 60652 | + | 0040266 |
| pfam | HRGMv2_0188_3 | HRGMv2_0188_3_58 | 60612 | 61325 | - | IspD | NTP_transf_3 |
| TC | HRGMv2_0188_3 | HRGMv2_0188_3_59 | 61452 | 62474 | + | 1.A.33.1.5 |
Gene ID: HRGMv2_0188_3_55
Type: CAZyme
Location: 55309 - 57663 (-)
Type: CAZyme
Location: 55309 - 57663 (-)
Gene ID: HRGMv2_0188_3_56
Type: TC
Location: 57770 - 60085 (+)
Type: TC
Location: 57770 - 60085 (+)
Gene ID: HRGMv2_0188_3_57
Type: TF
Location: 60140 - 60652 (+)
Type: TF
Location: 60140 - 60652 (+)
Gene ID: HRGMv2_0188_3_58
Type: pfam
Location: 60612 - 61325 (-)
Type: pfam
Location: 60612 - 61325 (-)
Gene ID: HRGMv2_0188_3_59
Type: TC
Location: 61452 - 62474 (+)
Type: TC
Location: 61452 - 62474 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp000431015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0188_3_59 | vegetarian > vegan | 1.51367 | 0.01867 |