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Cluster: HRGMv2_0188_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0188_1 HRGMv2_0188_1_34 35648 36727 + GT4
pfam HRGMv2_0188_1 HRGMv2_0188_1_35 37032 37559 + Hexapep
CAZyme HRGMv2_0188_1 HRGMv2_0188_1_36 37556 38599 + GT4
pfam HRGMv2_0188_1 HRGMv2_0188_1_37 38593 39609 + PGA_cap
pfam HRGMv2_0188_1 HRGMv2_0188_1_38 39623 40573 + ATPgrasp_TupA
CAZyme HRGMv2_0188_1 HRGMv2_0188_1_39 40577 41353 + GT2
pfam HRGMv2_0188_1 HRGMv2_0188_1_40 41422 44697 + DEAD | Helicase_C | ResIII | SWI2_SNF2
TC HRGMv2_0188_1 HRGMv2_0188_1_41 44907 45500 + 9.B.18.1.3
Gene ID: HRGMv2_0188_1_34
Type: CAZyme
Location: 35648 - 36727 (+)
Gene ID: HRGMv2_0188_1_35
Type: pfam
Location: 37032 - 37559 (+)
Gene ID: HRGMv2_0188_1_36
Type: CAZyme
Location: 37556 - 38599 (+)
Gene ID: HRGMv2_0188_1_37
Type: pfam
Location: 38593 - 39609 (+)
Gene ID: HRGMv2_0188_1_38
Type: pfam
Location: 39623 - 40573 (+)
Gene ID: HRGMv2_0188_1_39
Type: CAZyme
Location: 40577 - 41353 (+)
Gene ID: HRGMv2_0188_1_40
Type: pfam
Location: 41422 - 44697 (+)
Gene ID: HRGMv2_0188_1_41
Type: TC
Location: 44907 - 45500 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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