Cluster: HRGMv2_0187_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0187
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0187_4 | HRGMv2_0187_4_61 | 72481 | 73767 | + | 2.A.1.7.9 |
| CAZyme | HRGMv2_0187_4 | HRGMv2_0187_4_62 | 73761 | 74924 | + | CE9 |
| pfam | HRGMv2_0187_4 | HRGMv2_0187_4_63 | 74928 | 75695 | + | Glucosamine_iso |
| CAZyme | HRGMv2_0187_4 | HRGMv2_0187_4_64 | 75700 | 77235 | + | GH20 |
| NULL(UNKNOWN) | HRGMv2_0187_4 | HRGMv2_0187_4_65 | 77257 | 78354 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0187_4 | HRGMv2_0187_4_66 | 78367 | 81435 | + | 1.B.14.6.1 |
Gene ID: HRGMv2_0187_4_61
Type: TC
Location: 72481 - 73767 (+)
Type: TC
Location: 72481 - 73767 (+)
Gene ID: HRGMv2_0187_4_62
Type: CAZyme
Location: 73761 - 74924 (+)
Type: CAZyme
Location: 73761 - 74924 (+)
Gene ID: HRGMv2_0187_4_63
Type: pfam
Location: 74928 - 75695 (+)
Type: pfam
Location: 74928 - 75695 (+)
Gene ID: HRGMv2_0187_4_64
Type: CAZyme
Location: 75700 - 77235 (+)
Type: CAZyme
Location: 75700 - 77235 (+)
Gene ID: HRGMv2_0187_4_65
Type:
Location: 77257 - 78354 (+)
Type:
Location: 77257 - 78354 (+)
Gene ID: HRGMv2_0187_4_66
Type: TC
Location: 78367 - 81435 (+)
Type: TC
Location: 78367 - 81435 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp000433355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.