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Cluster: HRGMv2_0187_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0187_47 HRGMv2_0187_47_11 9787 10707 - 3.A.1.128.7
pfam HRGMv2_0187_47 HRGMv2_0187_47_12 10704 11747 - DNA_pol3_delta
CAZyme HRGMv2_0187_47 HRGMv2_0187_47_13 11759 14008 - GH3
pfam HRGMv2_0187_47 HRGMv2_0187_47_14 14028 14321 - Ribosomal_S30AE
pfam HRGMv2_0187_47 HRGMv2_0187_47_15 14311 15285 - Phage_integrase
TC HRGMv2_0187_47 HRGMv2_0187_47_16 15318 15971 - 2.A.115.2.8
pfam HRGMv2_0187_47 HRGMv2_0187_47_17 16048 16587 - ICMT | PEMT | DUF1295
TC HRGMv2_0187_47 HRGMv2_0187_47_18 16807 18813 - 9.B.14.3.1
pfam HRGMv2_0187_47 HRGMv2_0187_47_19 18813 20396 - DHOR
peptidase HRGMv2_0187_47 HRGMv2_0187_47_20 20547 21671 - M75.UPW
TC HRGMv2_0187_47 HRGMv2_0187_47_21 21718 22959 - 1.B.3.3.1
Gene ID: HRGMv2_0187_47_11
Type: TC
Location: 9787 - 10707 (-)
Gene ID: HRGMv2_0187_47_12
Type: pfam
Location: 10704 - 11747 (-)
Gene ID: HRGMv2_0187_47_13
Type: CAZyme
Location: 11759 - 14008 (-)
Gene ID: HRGMv2_0187_47_14
Type: pfam
Location: 14028 - 14321 (-)
Gene ID: HRGMv2_0187_47_15
Type: pfam
Location: 14311 - 15285 (-)
Gene ID: HRGMv2_0187_47_16
Type: TC
Location: 15318 - 15971 (-)
Gene ID: HRGMv2_0187_47_17
Type: pfam
Location: 16048 - 16587 (-)
Gene ID: HRGMv2_0187_47_18
Type: TC
Location: 16807 - 18813 (-)
Gene ID: HRGMv2_0187_47_19
Type: pfam
Location: 18813 - 20396 (-)
Gene ID: HRGMv2_0187_47_20
Type: peptidase
Location: 20547 - 21671 (-)
Gene ID: HRGMv2_0187_47_21
Type: TC
Location: 21718 - 22959 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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