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Cluster: HRGMv2_0187_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0187_30 HRGMv2_0187_30_20 23544 26168 + 1.C.105.2.12
pfam HRGMv2_0187_30 HRGMv2_0187_30_21 26179 27675 + AhpC-TSA | Redoxin | Thioredoxin_8
TC HRGMv2_0187_30 HRGMv2_0187_30_22 27715 30336 + 1.C.105.2.12
pfam HRGMv2_0187_30 HRGMv2_0187_30_23 30480 31034 - Ferritin | Rubrerythrin | RUBY_RBDX
TF HRGMv2_0187_30 HRGMv2_0187_30_24 31374 34709 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_0187_30 HRGMv2_0187_30_25 34859 37630 + GH3
CAZyme HRGMv2_0187_30 HRGMv2_0187_30_26 37644 39083 + GH28
CAZyme HRGMv2_0187_30 HRGMv2_0187_30_27 39123 40607 + GH28
Gene ID: HRGMv2_0187_30_20
Type: TC
Location: 23544 - 26168 (+)
Gene ID: HRGMv2_0187_30_21
Type: pfam
Location: 26179 - 27675 (+)
Gene ID: HRGMv2_0187_30_22
Type: TC
Location: 27715 - 30336 (+)
Gene ID: HRGMv2_0187_30_23
Type: pfam
Location: 30480 - 31034 (-)
Gene ID: HRGMv2_0187_30_24
Type: TF
Location: 31374 - 34709 (-)
Gene ID: HRGMv2_0187_30_25
Type: CAZyme
Location: 34859 - 37630 (+)
Gene ID: HRGMv2_0187_30_26
Type: CAZyme
Location: 37644 - 39083 (+)
Gene ID: HRGMv2_0187_30_27
Type: CAZyme
Location: 39123 - 40607 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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