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Cluster: HRGMv2_0187_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0187_27 HRGMv2_0187_27_10 13766 16867 - 1.B.14.6.1
TF HRGMv2_0187_27 HRGMv2_0187_27_11 17133 18158 + LacI
CAZyme HRGMv2_0187_27 HRGMv2_0187_27_12 18264 19424 + GH172
CAZyme HRGMv2_0187_27 HRGMv2_0187_27_13 19445 20872 + GH183
CAZyme HRGMv2_0187_27 HRGMv2_0187_27_14 20869 22842 + GH97
CAZyme HRGMv2_0187_27 HRGMv2_0187_27_15 22877 25375 + GH116
sulfatase HRGMv2_0187_27 HRGMv2_0187_27_16 26343 26951 + S1_15
CAZyme HRGMv2_0187_27 HRGMv2_0187_27_17 26955 27980 + GH43_3
Gene ID: HRGMv2_0187_27_10
Type: TC
Location: 13766 - 16867 (-)
Gene ID: HRGMv2_0187_27_11
Type: TF
Location: 17133 - 18158 (+)
Gene ID: HRGMv2_0187_27_12
Type: CAZyme
Location: 18264 - 19424 (+)
Gene ID: HRGMv2_0187_27_13
Type: CAZyme
Location: 19445 - 20872 (+)
Gene ID: HRGMv2_0187_27_14
Type: CAZyme
Location: 20869 - 22842 (+)
Gene ID: HRGMv2_0187_27_15
Type: CAZyme
Location: 22877 - 25375 (+)
Gene ID: HRGMv2_0187_27_16
Type: sulfatase
Location: 26343 - 26951 (+)
Gene ID: HRGMv2_0187_27_17
Type: CAZyme
Location: 26955 - 27980 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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