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Cluster: HRGMv2_0186_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0186_8 HRGMv2_0186_8_35 39131 40174 - 9.B.183.1.5
NULL(UNKNOWN) HRGMv2_0186_8 HRGMv2_0186_8_36 40184 41224 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0186_8 HRGMv2_0186_8_37 41270 43840 - 1.B.18.1.2
TC HRGMv2_0186_8 HRGMv2_0186_8_38 43858 44499 - 9.B.18.1.3
NULL(UNKNOWN) HRGMv2_0186_8 HRGMv2_0186_8_39 44961 45230 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0186_8 HRGMv2_0186_8_40 45398 47149 + CBM91 | GH43_12
CAZyme HRGMv2_0186_8 HRGMv2_0186_8_41 47282 48874 + GH28
Gene ID: HRGMv2_0186_8_35
Type: TC
Location: 39131 - 40174 (-)
Gene ID: HRGMv2_0186_8_36
Type:
Location: 40184 - 41224 (-)
Gene ID: HRGMv2_0186_8_37
Type: TC
Location: 41270 - 43840 (-)
Gene ID: HRGMv2_0186_8_38
Type: TC
Location: 43858 - 44499 (-)
Gene ID: HRGMv2_0186_8_39
Type:
Location: 44961 - 45230 (-)
Gene ID: HRGMv2_0186_8_40
Type: CAZyme
Location: 45398 - 47149 (+)
Gene ID: HRGMv2_0186_8_41
Type: CAZyme
Location: 47282 - 48874 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0186_8_35 vegetarian > vegan 15.98336 0.00565
HRGMv2_0186_8_36 vegetarian > vegan 2.49991 0.00565

🧭 Explore Read Mapping of CGC

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