PROTEIN: HRGMv2_0186_8_36
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Protein File & Metadata
Source:
HRGMv2_0186_8_36.pdb
Genome ID:
Protein ID:
HRGMv2_0186_8_36
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Protein Sequence
MKKEITPIDF SFILKAIIKN KKAFFYTMPI VFVLSSLIII SIPRSYTCEV KLAPESTSSG 60 IGSIGALASS FGVNLANKLD NEDAISPELY PDLMNSIDFK VSLFPIKIQT KDKKIETTYY 120 NYLEKHQKYA WWLIPINYIK KLFEKKEDKP FDSSKKIDPF ILTKKQKDIA SLIEQKIDCE 180 VDKKTNVISI VVTDQDPLVC ATMADSIKSR LQLFITDYRT NKAKIDLEYT KKLYVEAKSS 240 YDKARQLYAT FSDENQELIL ESYKAKQEDL ENEMQLKYNN YNSICQQLLA AKAKVQERTP 300 AFTTLQSASV PNKPSKPKRM LFVLAMLFLT FIITSIYSIN KMQKQE 346
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GGH7-F1-model_v4 | 1 | 346 | 1 | 338 | 0.582 |
0.6136 |
| AF-A0A077ZIR1-F1-model_v4 | 1 | 345 | 7 | 344 | 0.5746 |
0.6085 |
| AF-Q329W4-F1-model_v4 | 1 | 345 | 12 | 349 | 0.573 |
0.6102 |
| AF-O33789-F1-model_v4 | 1 | 346 | 12 | 348 | 0.569 |
0.6068 |
| AF-G3XCY2-F1-model_v4 | 1 | 346 | 10 | 345 | 0.5683 |
0.607 |
| AF-P0AG00-F1-model_v4 | 3 | 346 | 13 | 348 | 0.5653 |
0.6051 |
| AF-P26266-F1-model_v4 | 6 | 346 | 25 | 365 | 0.5529 |
0.6035 |
| AF-Q32IY2-F1-model_v4 | 6 | 346 | 25 | 365 | 0.5516 |
0.6025 |
| AF-Q9I1N4-F1-model_v4 | 9 | 346 | 6 | 488 | 0.5278 |
0.7149 |
| AF-Q32EF6-F1-model_v4 | 4 | 346 | 33 | 340 | 0.5152 |
0.5899 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A387H7L2-F1-model_v4 | GT0 | 2 | 346 | 20 | 480 | 0.4069 |
0.6219 |
| AF-A0A0B4X6N3-F1-model_v4 | GT0 | 1 | 346 | 18 | 480 | 0.404 |
0.6157 |
| A0A2L0WKS9 | GT0 | 2 | 346 | 21 | 481 | 0.4026 |
0.6158 |
| AF-A0A2L0WKS9-F1-model_v4 | GT0 | 2 | 346 | 21 | 481 | 0.4026 |
0.6158 |
| AF-A0A1L5NL39-F1-model_v4 | GT0 | 3 | 346 | 21 | 480 | 0.402 |
0.6157 |
| AF-A0A1L5P6C4-F1-model_v4 | GT0 | 2 | 346 | 20 | 480 | 0.4002 |
0.6118 |
| QNN05996.1 | GT4 | 1 | 346 | 5 | 466 | 0.381 |
0.5908 |
| WGH78710.1 | PL1_2 | 2 | 346 | 30 | 435 | 0.3624 |
0.5628 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8p3p-assembly1.cif.gz_C | 5 | 345 | 1 | 332 | 0.573 |
0.6061 |
| 8bhw-assembly1.cif.gz_A | 5 | 345 | 1 | 332 | 0.5714 |
0.6046 |
| 8p3o-assembly1.cif.gz_B | 6 | 345 | 1 | 332 | 0.5662 |
0.5985 |
| 7nhr-assembly1.cif.gz_G | 6 | 346 | 1 | 312 | 0.489 |
0.6737 |
| 7nii-assembly1.cif.gz_H | 6 | 346 | 1 | 316 | 0.4664 |
0.6353 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AG02-F1-model_v4 | 1 | 345 | 11 | 348 | 0.5733 |
0.61 |
| AF-P0AG01-F1-model_v4 | 1 | 345 | 11 | 348 | 0.5704 |
0.6078 |
| AF-O33789-F1-model_v4 | 1 | 346 | 12 | 348 | 0.569 |
0.6068 |
| AF-P0AG00-F1-model_v4 | 3 | 346 | 13 | 348 | 0.5653 |
0.6051 |
| AF-P32014-F1-model_v4 | 15 | 336 | 20 | 373 | 0.5628 |
0.6531 |
| AF-P26266-F1-model_v4 | 6 | 346 | 25 | 365 | 0.5529 |
0.6035 |
| AF-P95730-F1-model_v4 | 4 | 346 | 14 | 321 | 0.5288 |
0.5912 |
| AF-P35272-F1-model_v4 | 4 | 346 | 14 | 321 | 0.5273 |
0.5905 |
| AF-O33953-F1-model_v4 | 2 | 346 | 12 | 321 | 0.5265 |
0.5861 |
| AF-P37792-F1-model_v4 | 4 | 346 | 14 | 321 | 0.5238 |
0.5853 |