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Cluster: HRGMv2_0185_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0185_14 HRGMv2_0185_14_61 71046 72047 + GT2
TC HRGMv2_0185_14 HRGMv2_0185_14_62 72241 73509 - 3.D.5.1.1
TC HRGMv2_0185_14 HRGMv2_0185_14_63 73517 74143 - 3.D.5.1.1
TC HRGMv2_0185_14 HRGMv2_0185_14_64 74167 74793 - 3.D.5.1.1
TC HRGMv2_0185_14 HRGMv2_0185_14_65 74807 75532 - 3.D.5.1.1
TC HRGMv2_0185_14 HRGMv2_0185_14_66 75545 76702 - 3.D.5.1.1
pfam HRGMv2_0185_14 HRGMv2_0185_14_67 76715 78064 - NQRA_N | NQRA_SLBB | NQRA_2nd
pfam HRGMv2_0185_14 HRGMv2_0185_14_68 78378 82784 + TamB
TC HRGMv2_0185_14 HRGMv2_0185_14_69 82896 84002 - 3.D.2.3.1
Gene ID: HRGMv2_0185_14_61
Type: CAZyme
Location: 71046 - 72047 (+)
Gene ID: HRGMv2_0185_14_62
Type: TC
Location: 72241 - 73509 (-)
Gene ID: HRGMv2_0185_14_63
Type: TC
Location: 73517 - 74143 (-)
Gene ID: HRGMv2_0185_14_64
Type: TC
Location: 74167 - 74793 (-)
Gene ID: HRGMv2_0185_14_65
Type: TC
Location: 74807 - 75532 (-)
Gene ID: HRGMv2_0185_14_66
Type: TC
Location: 75545 - 76702 (-)
Gene ID: HRGMv2_0185_14_67
Type: pfam
Location: 76715 - 78064 (-)
Gene ID: HRGMv2_0185_14_68
Type: pfam
Location: 78378 - 82784 (+)
Gene ID: HRGMv2_0185_14_69
Type: TC
Location: 82896 - 84002 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella rara

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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