dbCAN Logo

Cluster: HRGMv2_0184_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0184_26 HRGMv2_0184_26_9 13607 16963 - GH2
CAZyme HRGMv2_0184_26 HRGMv2_0184_26_10 17535 21170 + GH2
CAZyme HRGMv2_0184_26 HRGMv2_0184_26_11 21297 22523 + GH43_2
NULL(UNKNOWN) HRGMv2_0184_26 HRGMv2_0184_26_12 22563 22724 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0184_26 HRGMv2_0184_26_13 22674 25187 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0184_26 HRGMv2_0184_26_14 25719 27926 + GH3
NULL(UNKNOWN) HRGMv2_0184_26 HRGMv2_0184_26_15 28939 31086 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0184_26 HRGMv2_0184_26_16 31319 34648 + 1.B.14.6.2
TC HRGMv2_0184_26 HRGMv2_0184_26_17 34664 36604 + 8.A.46.2.1
CAZyme HRGMv2_0184_26 HRGMv2_0184_26_18 36645 37967 + GH99
Gene ID: HRGMv2_0184_26_9
Type: CAZyme
Location: 13607 - 16963 (-)
Gene ID: HRGMv2_0184_26_10
Type: CAZyme
Location: 17535 - 21170 (+)
Gene ID: HRGMv2_0184_26_11
Type: CAZyme
Location: 21297 - 22523 (+)
Gene ID: HRGMv2_0184_26_12
Type:
Location: 22563 - 22724 (+)
Gene ID: HRGMv2_0184_26_13
Type:
Location: 22674 - 25187 (-)
Gene ID: HRGMv2_0184_26_14
Type: CAZyme
Location: 25719 - 27926 (+)
Gene ID: HRGMv2_0184_26_15
Type:
Location: 28939 - 31086 (+)
Gene ID: HRGMv2_0184_26_16
Type: TC
Location: 31319 - 34648 (+)
Gene ID: HRGMv2_0184_26_17
Type: TC
Location: 34664 - 36604 (+)
Gene ID: HRGMv2_0184_26_18
Type: CAZyme
Location: 36645 - 37967 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List