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Cluster: HRGMv2_0184_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0184_21 HRGMv2_0184_21_31 37316 40630 + 1.B.14.6.2
TC HRGMv2_0184_21 HRGMv2_0184_21_32 40643 42592 + 8.A.46.2.2
CAZyme HRGMv2_0184_21 HRGMv2_0184_21_33 42604 43890 + GH99
pfam HRGMv2_0184_21 HRGMv2_0184_21_34 44398 45075 - OMP_b-brl | OMP_b-brl_2
NULL(UNKNOWN) HRGMv2_0184_21 HRGMv2_0184_21_35 45916 46023 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0184_21 HRGMv2_0184_21_36 46306 47628 + 3.A.18.1.1
pfam HRGMv2_0184_21 HRGMv2_0184_21_37 47659 48612 - PCMD
TC HRGMv2_0184_21 HRGMv2_0184_21_38 48726 49583 - 2.A.64.1.3
Gene ID: HRGMv2_0184_21_31
Type: TC
Location: 37316 - 40630 (+)
Gene ID: HRGMv2_0184_21_32
Type: TC
Location: 40643 - 42592 (+)
Gene ID: HRGMv2_0184_21_33
Type: CAZyme
Location: 42604 - 43890 (+)
Gene ID: HRGMv2_0184_21_34
Type: pfam
Location: 44398 - 45075 (-)
Gene ID: HRGMv2_0184_21_35
Type:
Location: 45916 - 46023 (-)
Gene ID: HRGMv2_0184_21_36
Type: TC
Location: 46306 - 47628 (+)
Gene ID: HRGMv2_0184_21_37
Type: pfam
Location: 47659 - 48612 (-)
Gene ID: HRGMv2_0184_21_38
Type: TC
Location: 48726 - 49583 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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