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Cluster: HRGMv2_0184_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0184_7 HRGMv2_0184_7_30 35720 37696 - PL9_1
TF HRGMv2_0184_7 HRGMv2_0184_7_31 37847 42274 - HTH_AraC
pfam HRGMv2_0184_7 HRGMv2_0184_7_32 42304 43560 - DUF4861
CAZyme HRGMv2_0184_7 HRGMv2_0184_7_33 43646 45331 - GH28
CAZyme HRGMv2_0184_7 HRGMv2_0184_7_34 45442 46875 - PL1_2
sulfatase HRGMv2_0184_7 HRGMv2_0184_7_35 47227 49194 + S1_67
pfam HRGMv2_0184_7 HRGMv2_0184_7_36 49504 51579 - TonB_dep_Rec_b-barrel | Plug
TC HRGMv2_0184_7 HRGMv2_0184_7_37 52346 53473 + 3.A.1.13.2
TC HRGMv2_0184_7 HRGMv2_0184_7_38 53473 54501 + 3.A.1.13.2
TC HRGMv2_0184_7 HRGMv2_0184_7_39 54501 55517 + 3.A.1.13.2
CAZyme HRGMv2_0184_7 HRGMv2_0184_7_40 55564 56697 - GT19
Gene ID: HRGMv2_0184_7_30
Type: CAZyme
Location: 35720 - 37696 (-)
Gene ID: HRGMv2_0184_7_31
Type: TF
Location: 37847 - 42274 (-)
Gene ID: HRGMv2_0184_7_32
Type: pfam
Location: 42304 - 43560 (-)
Gene ID: HRGMv2_0184_7_33
Type: CAZyme
Location: 43646 - 45331 (-)
Gene ID: HRGMv2_0184_7_34
Type: CAZyme
Location: 45442 - 46875 (-)
Gene ID: HRGMv2_0184_7_35
Type: sulfatase
Location: 47227 - 49194 (+)
Gene ID: HRGMv2_0184_7_36
Type: pfam
Location: 49504 - 51579 (-)
Gene ID: HRGMv2_0184_7_37
Type: TC
Location: 52346 - 53473 (+)
Gene ID: HRGMv2_0184_7_38
Type: TC
Location: 53473 - 54501 (+)
Gene ID: HRGMv2_0184_7_39
Type: TC
Location: 54501 - 55517 (+)
Gene ID: HRGMv2_0184_7_40
Type: CAZyme
Location: 55564 - 56697 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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