dbCAN Logo

Cluster: HRGMv2_0184_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0184_6 HRGMv2_0184_6_25 27615 29489 - 1.C.39.4.5
pfam HRGMv2_0184_6 HRGMv2_0184_6_26 29515 29940 - YbeY
TC HRGMv2_0184_6 HRGMv2_0184_6_27 30047 31279 - 9.B.156.3.1
pfam HRGMv2_0184_6 HRGMv2_0184_6_28 31841 32806 + 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored
pfam HRGMv2_0184_6 HRGMv2_0184_6_29 32814 33530 + DNA_alkylation
CAZyme HRGMv2_0184_6 HRGMv2_0184_6_30 33616 34590 + GT2
pfam HRGMv2_0184_6 HRGMv2_0184_6_31 34613 35386 + NTP_transferase | NTP_transf_3
TC HRGMv2_0184_6 HRGMv2_0184_6_32 35471 37168 - 2.A.53.3.9
Gene ID: HRGMv2_0184_6_25
Type: TC
Location: 27615 - 29489 (-)
Gene ID: HRGMv2_0184_6_26
Type: pfam
Location: 29515 - 29940 (-)
Gene ID: HRGMv2_0184_6_27
Type: TC
Location: 30047 - 31279 (-)
Gene ID: HRGMv2_0184_6_28
Type: pfam
Location: 31841 - 32806 (+)
Gene ID: HRGMv2_0184_6_29
Type: pfam
Location: 32814 - 33530 (+)
Gene ID: HRGMv2_0184_6_30
Type: CAZyme
Location: 33616 - 34590 (+)
Gene ID: HRGMv2_0184_6_31
Type: pfam
Location: 34613 - 35386 (+)
Gene ID: HRGMv2_0184_6_32
Type: TC
Location: 35471 - 37168 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List