Cluster: HRGMv2_0184_CGC22
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_0184
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0184_5 | HRGMv2_0184_5_79 | 91750 | 95238 | - | CBM32 | GH2 |
| CAZyme | HRGMv2_0184_5 | HRGMv2_0184_5_80 | 95262 | 98165 | - | GH31_4 |
| CAZyme | HRGMv2_0184_5 | HRGMv2_0184_5_81 | 98197 | 99231 | - | CE4 |
| CAZyme | HRGMv2_0184_5 | HRGMv2_0184_5_82 | 99445 | 101175 | - | CBM32 | GH43_28 |
| CAZyme | HRGMv2_0184_5 | HRGMv2_0184_5_83 | 101285 | 104875 | - | GH2 |
| CAZyme | HRGMv2_0184_5 | HRGMv2_0184_5_84 | 105004 | 107904 | - | CBM6 |
| peptidase | HRGMv2_0184_5 | HRGMv2_0184_5_85 | 107962 | 108948 | - | S09.UPB |
| CAZyme | HRGMv2_0184_5 | HRGMv2_0184_5_86 | 109321 | 111297 | + | CE20 | CE20 |
| CAZyme | HRGMv2_0184_5 | HRGMv2_0184_5_87 | 111511 | 113769 | - | GH92 |
| NULL(UNKNOWN) | HRGMv2_0184_5 | HRGMv2_0184_5_88 | 114576 | 117104 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0184_5 | HRGMv2_0184_5_89 | 117148 | 117285 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0184_5 | HRGMv2_0184_5_90 | 117491 | 118939 | - | GH28 |
| pfam | HRGMv2_0184_5 | HRGMv2_0184_5_91 | 119287 | 120366 | - | IMPDH | NMO |
| TC | HRGMv2_0184_5 | HRGMv2_0184_5_92 | 120841 | 122025 | - | 9.B.169.1.1 |
Gene ID: HRGMv2_0184_5_79
Type: CAZyme
Location: 91750 - 95238 (-)
Type: CAZyme
Location: 91750 - 95238 (-)
Gene ID: HRGMv2_0184_5_80
Type: CAZyme
Location: 95262 - 98165 (-)
Type: CAZyme
Location: 95262 - 98165 (-)
Gene ID: HRGMv2_0184_5_81
Type: CAZyme
Location: 98197 - 99231 (-)
Type: CAZyme
Location: 98197 - 99231 (-)
Gene ID: HRGMv2_0184_5_82
Type: CAZyme
Location: 99445 - 101175 (-)
Type: CAZyme
Location: 99445 - 101175 (-)
Gene ID: HRGMv2_0184_5_83
Type: CAZyme
Location: 101285 - 104875 (-)
Type: CAZyme
Location: 101285 - 104875 (-)
Gene ID: HRGMv2_0184_5_84
Type: CAZyme
Location: 105004 - 107904 (-)
Type: CAZyme
Location: 105004 - 107904 (-)
Gene ID: HRGMv2_0184_5_85
Type: peptidase
Location: 107962 - 108948 (-)
Type: peptidase
Location: 107962 - 108948 (-)
Gene ID: HRGMv2_0184_5_86
Type: CAZyme
Location: 109321 - 111297 (+)
Type: CAZyme
Location: 109321 - 111297 (+)
Gene ID: HRGMv2_0184_5_87
Type: CAZyme
Location: 111511 - 113769 (-)
Type: CAZyme
Location: 111511 - 113769 (-)
Gene ID: HRGMv2_0184_5_88
Type:
Location: 114576 - 117104 (+)
Type:
Location: 114576 - 117104 (+)
Gene ID: HRGMv2_0184_5_89
Type:
Location: 117148 - 117285 (-)
Type:
Location: 117148 - 117285 (-)
Gene ID: HRGMv2_0184_5_90
Type: CAZyme
Location: 117491 - 118939 (-)
Type: CAZyme
Location: 117491 - 118939 (-)
Gene ID: HRGMv2_0184_5_91
Type: pfam
Location: 119287 - 120366 (-)
Type: pfam
Location: 119287 - 120366 (-)
Gene ID: HRGMv2_0184_5_92
Type: TC
Location: 120841 - 122025 (-)
Type: TC
Location: 120841 - 122025 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Coprobacteraceae
Genus
Coprobacter
Species
Coprobacter sp900545915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.