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Cluster: HRGMv2_0184_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0184_3 HRGMv2_0184_3_86 108517 109731 + GH88
TC HRGMv2_0184_3 HRGMv2_0184_3_87 109750 112941 + 1.B.14.6.1
TC HRGMv2_0184_3 HRGMv2_0184_3_88 112962 114551 + 8.A.46.1.3
pfam HRGMv2_0184_3 HRGMv2_0184_3_89 114545 115522 + DUF5017
CAZyme HRGMv2_0184_3 HRGMv2_0184_3_90 115535 118177 + PL8
CAZyme HRGMv2_0184_3 HRGMv2_0184_3_91 118204 119610 + CE20
STP HRGMv2_0184_3 HRGMv2_0184_3_92 119629 121050 + Pyr_redox_2
CAZyme HRGMv2_0184_3 HRGMv2_0184_3_93 121112 123292 + PL8_3
TC HRGMv2_0184_3 HRGMv2_0184_3_94 123474 125126 - 4.C.1.1.6
Gene ID: HRGMv2_0184_3_86
Type: CAZyme
Location: 108517 - 109731 (+)
Gene ID: HRGMv2_0184_3_87
Type: TC
Location: 109750 - 112941 (+)
Gene ID: HRGMv2_0184_3_88
Type: TC
Location: 112962 - 114551 (+)
Gene ID: HRGMv2_0184_3_89
Type: pfam
Location: 114545 - 115522 (+)
Gene ID: HRGMv2_0184_3_90
Type: CAZyme
Location: 115535 - 118177 (+)
Gene ID: HRGMv2_0184_3_91
Type: CAZyme
Location: 118204 - 119610 (+)
Gene ID: HRGMv2_0184_3_92
Type: STP
Location: 119629 - 121050 (+)
Gene ID: HRGMv2_0184_3_93
Type: CAZyme
Location: 121112 - 123292 (+)
Gene ID: HRGMv2_0184_3_94
Type: TC
Location: 123474 - 125126 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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