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Cluster: HRGMv2_0184_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0184_3 HRGMv2_0184_3_28 26692 29739 - PL8_2
CAZyme HRGMv2_0184_3 HRGMv2_0184_3_29 29964 31172 - GH88
TC HRGMv2_0184_3 HRGMv2_0184_3_30 31631 34708 + 1.B.14.6.1
TC HRGMv2_0184_3 HRGMv2_0184_3_31 34731 36479 + 8.A.46.1.3
pfam HRGMv2_0184_3 HRGMv2_0184_3_32 36499 37521 + DUF5017
CAZyme HRGMv2_0184_3 HRGMv2_0184_3_33 37709 40618 + PL8_2
pfam HRGMv2_0184_3 HRGMv2_0184_3_34 40651 41217 + CBM_4_9
NULL(UNKNOWN) HRGMv2_0184_3 HRGMv2_0184_3_35 41243 42541 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0184_3 HRGMv2_0184_3_36 42630 45821 + PL8_2
Gene ID: HRGMv2_0184_3_28
Type: CAZyme
Location: 26692 - 29739 (-)
Gene ID: HRGMv2_0184_3_29
Type: CAZyme
Location: 29964 - 31172 (-)
Gene ID: HRGMv2_0184_3_30
Type: TC
Location: 31631 - 34708 (+)
Gene ID: HRGMv2_0184_3_31
Type: TC
Location: 34731 - 36479 (+)
Gene ID: HRGMv2_0184_3_32
Type: pfam
Location: 36499 - 37521 (+)
Gene ID: HRGMv2_0184_3_33
Type: CAZyme
Location: 37709 - 40618 (+)
Gene ID: HRGMv2_0184_3_34
Type: pfam
Location: 40651 - 41217 (+)
Gene ID: HRGMv2_0184_3_35
Type:
Location: 41243 - 42541 (+)
Gene ID: HRGMv2_0184_3_36
Type: CAZyme
Location: 42630 - 45821 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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