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Cluster: HRGMv2_0177_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_55 HRGMv2_0177_55_105 109667 110803 - GH105
NULL(UNKNOWN) HRGMv2_0177_55 HRGMv2_0177_55_106 110974 111936 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0177_55 HRGMv2_0177_55_107 112660 114219 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_55 HRGMv2_0177_55_108 114329 116779 - GH2
CAZyme HRGMv2_0177_55 HRGMv2_0177_55_109 116792 118021 - GH88
pfam HRGMv2_0177_55 HRGMv2_0177_55_110 118160 118897 - DAHP_synth_1
TC HRGMv2_0177_55 HRGMv2_0177_55_111 119011 123003 - 9.A.25.1.1
Gene ID: HRGMv2_0177_55_105
Type: CAZyme
Location: 109667 - 110803 (-)
Gene ID: HRGMv2_0177_55_106
Type:
Location: 110974 - 111936 (+)
Gene ID: HRGMv2_0177_55_107
Type:
Location: 112660 - 114219 (-)
Gene ID: HRGMv2_0177_55_108
Type: CAZyme
Location: 114329 - 116779 (-)
Gene ID: HRGMv2_0177_55_109
Type: CAZyme
Location: 116792 - 118021 (-)
Gene ID: HRGMv2_0177_55_110
Type: pfam
Location: 118160 - 118897 (-)
Gene ID: HRGMv2_0177_55_111
Type: TC
Location: 119011 - 123003 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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