PROTEIN: HRGMv2_0177_55_106
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Protein File & Metadata
Source:
HRGMv2_0177_55_106.pdb
Genome ID:
Protein ID:
HRGMv2_0177_55_106
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Protein Sequence
MKKQSLIYPL VAACMYFTPS LSCHAGKVFN NSVPEKDSIV YTLQGSMQAD KDLIGKDYNA 60 IHQYMRRLGW DYSEHPNSSP KDHHTGIHAE VVYDDILKQY VFKFTNHAGE FLDGDRGSLK 120 DRQRNEMKSQ TSPAWQKLNG NWDEWQQLKW KFKIPKGFRP STSFCHIHQL KAQEGNNGAP 180 LITITPRCDA DGSNRRIQVI HTGDTRASSK GILIDNISLK EFEDEWVQVE TEMHYTDHGS 240 FRIKITRISD GKVLINQFFD DVDLWRSGAT NIRNKFGIYR SLGGKMESSD DRPKNGIKDE 300 HLYLGDFQVY ERLPYGKTRK 320
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175VXI0-F1-model_v4 | 41 | 312 | 16 | 242 | 0.6493 |
0.8151 |
| AF-Q9I2V8-F1-model_v4 | 47 | 312 | 1 | 231 | 0.639 |
0.7598 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B4NZL9 | PL0 | 31 | 316 | 30 | 268 | 0.6979 |
0.8615 |
| A0A5C4WVY0 | PL0 | 38 | 312 | 33 | 276 | 0.6683 |
0.8344 |
| AF-A0A518IDG5-F1-model_v4 | PL14 | 39 | 315 | 16 | 266 | 0.6594 |
0.78 |
| AF-A0A1M5SI30-F1-model_v4 | PL20 | 37 | 312 | 20 | 232 | 0.6558 |
0.8567 |
| AF-A0A7Z2T624-F1-model_v4 | PL0 | 42 | 313 | 36 | 261 | 0.6554 |
0.8399 |
| A0A0Q9Z5U6 | PL0 | 40 | 313 | 41 | 273 | 0.6535 |
0.8484 |
| AF-A0A2L1HKQ0-F1-model_v4 | PL7 | 47 | 312 | 1 | 224 | 0.6533 |
0.7857 |
| AF-A0A4P6G3T8-F1-model_v4 | PL7 | 47 | 312 | 1 | 224 | 0.6524 |
0.7847 |
| AVF39645.1 | PL14 | 36 | 320 | 24 | 279 | 0.6515 |
0.7755 |
| AF-A0A410RTN4-F1-model_v4 | PL20 | 37 | 312 | 19 | 246 | 0.6514 |
0.8209 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AVF39645.1 | PL14 | 36 | 320 | 24 | 279 | 0.6515 |
0.7755 |
| A0A1H9E2B5 | PL7_2 | 47 | 316 | 1 | 228 | 0.6506 |
0.7808 |
| A0A2H4SE99 | PL20 | 38 | 312 | 17 | 249 | 0.6495 |
0.8068 |
| A0A285P9P7 | PL7_1 | 47 | 316 | 1 | 221 | 0.647 |
0.782 |
| A0A517NTW7 | PL14 | 42 | 310 | 8 | 243 | 0.6449 |
0.7722 |
| A0A1L7G1R6 | PL7_1 | 48 | 312 | 1 | 226 | 0.6427 |
0.7708 |
| A0A0B6X837 | PL14_3 | 40 | 312 | 13 | 254 | 0.6416 |
0.7751 |
| A0A0S1MIR9 | GH131 | 38 | 315 | 21 | 297 | 0.6398 |
0.744 |
| A0A9E8RK35 | PL7_1 | 47 | 312 | 1 | 231 | 0.6395 |
0.7606 |
| A0A517NY95 | PL14 | 36 | 312 | 24 | 294 | 0.6388 |
0.7389 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2zzj-assembly1.cif.gz_A | 42 | 312 | 1 | 229 | 0.6671 |
0.8089 |
| 6kcv-assembly3.cif.gz_C | 43 | 317 | 4 | 244 | 0.6515 |
0.7668 |
| 6kzk-assembly3.cif.gz_C | 43 | 313 | 4 | 241 | 0.6492 |
0.7681 |
| 2cws-assembly1.cif.gz_A | 51 | 315 | 1 | 227 | 0.6314 |
0.7555 |
| 2zaa-assembly1.cif.gz_A | 50 | 315 | 1 | 230 | 0.6293 |
0.753 |
| 2zab-assembly1.cif.gz_A | 51 | 312 | 1 | 226 | 0.6284 |
0.7534 |
| 5zqi-assembly1.cif.gz_A | 51 | 313 | 1 | 216 | 0.627 |
0.7654 |
| 2za9-assembly1.cif.gz_A | 51 | 312 | 2 | 227 | 0.627 |
0.7539 |
| 2w68-assembly2.cif.gz_B | 42 | 315 | 1 | 193 | 0.6265 |
0.8008 |
| 3gne-assembly2.cif.gz_B | 41 | 311 | 1 | 242 | 0.6087 |
0.7145 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q59639-F1-model_v4 | 33 | 313 | 23 | 233 | 0.6258 |
0.8091 |
| AF-Q59478-F1-model_v4 | 52 | 314 | 20 | 306 | 0.588 |
0.7118 |
| AF-Q40987-F1-model_v4 | 40 | 320 | 31 | 266 | 0.5663 |
0.7112 |
| AF-P58906-F1-model_v4 | 40 | 315 | 32 | 281 | 0.5341 |
0.6515 |