dbCAN Logo

Cluster: HRGMv2_0171_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0171_23 HRGMv2_0171_23_16 17738 19582 + 2.A.16.2.2
pfam HRGMv2_0171_23 HRGMv2_0171_23_17 19591 20799 + Phosphodiest
pfam HRGMv2_0171_23 HRGMv2_0171_23_18 21087 22199 - DZR
CAZyme HRGMv2_0171_23 HRGMv2_0171_23_19 22225 22911 - GH25
peptidase HRGMv2_0171_23 HRGMv2_0171_23_20 22968 24029 - M28.UPA
TC HRGMv2_0171_23 HRGMv2_0171_23_21 24046 25824 - 3.A.1.120.6
pfam HRGMv2_0171_23 HRGMv2_0171_23_22 25837 26445 - MMR_HSR1
CAZyme HRGMv2_0171_23 HRGMv2_0171_23_23 26545 27528 + GH109
Gene ID: HRGMv2_0171_23_16
Type: TC
Location: 17738 - 19582 (+)
Gene ID: HRGMv2_0171_23_17
Type: pfam
Location: 19591 - 20799 (+)
Gene ID: HRGMv2_0171_23_18
Type: pfam
Location: 21087 - 22199 (-)
Gene ID: HRGMv2_0171_23_19
Type: CAZyme
Location: 22225 - 22911 (-)
Gene ID: HRGMv2_0171_23_20
Type: peptidase
Location: 22968 - 24029 (-)
Gene ID: HRGMv2_0171_23_21
Type: TC
Location: 24046 - 25824 (-)
Gene ID: HRGMv2_0171_23_22
Type: pfam
Location: 25837 - 26445 (-)
Gene ID: HRGMv2_0171_23_23
Type: CAZyme
Location: 26545 - 27528 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List