Cluster: HRGMv2_0171_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0171
- CGC Family ID: CGCFAM_00795
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0171_9 | HRGMv2_0171_9_41 | 46627 | 47520 | + | CBM50 |
| NULL(UNKNOWN) | HRGMv2_0171_9 | HRGMv2_0171_9_42 | 47790 | 48287 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0171_9 | HRGMv2_0171_9_43 | 49538 | 50563 | + | 9.A.40.2.2 |
| pfam | HRGMv2_0171_9 | HRGMv2_0171_9_44 | 50965 | 51891 | - | Glutaminase |
| pfam | HRGMv2_0171_9 | HRGMv2_0171_9_45 | 51998 | 52459 | - | YgbB |
| TC | HRGMv2_0171_9 | HRGMv2_0171_9_46 | 52500 | 53675 | - | 1.B.57.4.6 |
Gene ID: HRGMv2_0171_9_41
Type: CAZyme
Location: 46627 - 47520 (+)
Type: CAZyme
Location: 46627 - 47520 (+)
Gene ID: HRGMv2_0171_9_42
Type:
Location: 47790 - 48287 (+)
Type:
Location: 47790 - 48287 (+)
Gene ID: HRGMv2_0171_9_43
Type: TC
Location: 49538 - 50563 (+)
Type: TC
Location: 49538 - 50563 (+)
Gene ID: HRGMv2_0171_9_44
Type: pfam
Location: 50965 - 51891 (-)
Type: pfam
Location: 50965 - 51891 (-)
Gene ID: HRGMv2_0171_9_45
Type: pfam
Location: 51998 - 52459 (-)
Type: pfam
Location: 51998 - 52459 (-)
Gene ID: HRGMv2_0171_9_46
Type: TC
Location: 52500 - 53675 (-)
Type: TC
Location: 52500 - 53675 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp002251385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0171_9_43 | vegetarian > omnivore | 1.16318 | 0.02242 |