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Cluster: HRGMv2_0171_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0171_7 HRGMv2_0171_7_43 50855 51688 + 3.A.1.15.7
TC HRGMv2_0171_7 HRGMv2_0171_7_44 51729 52430 + 3.A.1.15.5
pfam HRGMv2_0171_7 HRGMv2_0171_7_45 52589 55921 + TMEM260-like
CAZyme HRGMv2_0171_7 HRGMv2_0171_7_46 55984 56535 + CE4
pfam HRGMv2_0171_7 HRGMv2_0171_7_47 56513 57442 + QueG_DUF1730 | Fer4_7 | Fer4_16
pfam HRGMv2_0171_7 HRGMv2_0171_7_48 57935 59419 + Polysacc_synt_3
CAZyme HRGMv2_0171_7 HRGMv2_0171_7_49 59419 60408 + GT2
TC HRGMv2_0171_7 HRGMv2_0171_7_50 60569 61912 + 2.A.62.1.3
pfam HRGMv2_0171_7 HRGMv2_0171_7_51 61940 62917 + PFK
TC HRGMv2_0171_7 HRGMv2_0171_7_52 62953 64479 + 3.A.2.1.2
pfam HRGMv2_0171_7 HRGMv2_0171_7_53 64505 64747 + ATP-synt_DE_N
NULL(UNKNOWN) HRGMv2_0171_7 HRGMv2_0171_7_54 64766 65191 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0171_7 HRGMv2_0171_7_55 65204 66256 + 3.A.2.1.7
TC HRGMv2_0171_7 HRGMv2_0171_7_56 66331 66570 + 3.A.2.1.6
pfam HRGMv2_0171_7 HRGMv2_0171_7_57 66589 67101 + ATP-synt_B
pfam HRGMv2_0171_7 HRGMv2_0171_7_58 67109 67642 + OSCP
TC HRGMv2_0171_7 HRGMv2_0171_7_59 67738 69297 + 3.A.2.1.7
TC HRGMv2_0171_7 HRGMv2_0171_7_60 69304 70275 + 3.A.2.1.5
Gene ID: HRGMv2_0171_7_43
Type: TC
Location: 50855 - 51688 (+)
Gene ID: HRGMv2_0171_7_44
Type: TC
Location: 51729 - 52430 (+)
Gene ID: HRGMv2_0171_7_45
Type: pfam
Location: 52589 - 55921 (+)
Gene ID: HRGMv2_0171_7_46
Type: CAZyme
Location: 55984 - 56535 (+)
Gene ID: HRGMv2_0171_7_47
Type: pfam
Location: 56513 - 57442 (+)
Gene ID: HRGMv2_0171_7_48
Type: pfam
Location: 57935 - 59419 (+)
Gene ID: HRGMv2_0171_7_49
Type: CAZyme
Location: 59419 - 60408 (+)
Gene ID: HRGMv2_0171_7_50
Type: TC
Location: 60569 - 61912 (+)
Gene ID: HRGMv2_0171_7_51
Type: pfam
Location: 61940 - 62917 (+)
Gene ID: HRGMv2_0171_7_52
Type: TC
Location: 62953 - 64479 (+)
Gene ID: HRGMv2_0171_7_53
Type: pfam
Location: 64505 - 64747 (+)
Gene ID: HRGMv2_0171_7_54
Type:
Location: 64766 - 65191 (+)
Gene ID: HRGMv2_0171_7_55
Type: TC
Location: 65204 - 66256 (+)
Gene ID: HRGMv2_0171_7_56
Type: TC
Location: 66331 - 66570 (+)
Gene ID: HRGMv2_0171_7_57
Type: pfam
Location: 66589 - 67101 (+)
Gene ID: HRGMv2_0171_7_58
Type: pfam
Location: 67109 - 67642 (+)
Gene ID: HRGMv2_0171_7_59
Type: TC
Location: 67738 - 69297 (+)
Gene ID: HRGMv2_0171_7_60
Type: TC
Location: 69304 - 70275 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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