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Cluster: HRGMv2_0171_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0171_6 HRGMv2_0171_6_48 52340 53824 + GH28
CAZyme HRGMv2_0171_6 HRGMv2_0171_6_49 53844 54500 + GH28
CAZyme HRGMv2_0171_6 HRGMv2_0171_6_50 54525 56036 + GH28
pfam HRGMv2_0171_6 HRGMv2_0171_6_51 56520 57968 - SSF
pfam HRGMv2_0171_6 HRGMv2_0171_6_52 57975 61439 - DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
CAZyme HRGMv2_0171_6 HRGMv2_0171_6_53 61476 62228 - GT2
NULL(UNKNOWN) HRGMv2_0171_6 HRGMv2_0171_6_54 62444 62812 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0171_6 HRGMv2_0171_6_55 62856 64337 - 3.D.1.2.1
TC HRGMv2_0171_6 HRGMv2_0171_6_56 64372 65874 - 3.D.1.2.1
TC HRGMv2_0171_6 HRGMv2_0171_6_57 65887 67836 - 3.D.1.8.1
TC HRGMv2_0171_6 HRGMv2_0171_6_58 67843 68154 - 3.D.1.2.1
TC HRGMv2_0171_6 HRGMv2_0171_6_59 68151 68672 - 3.D.9.1.1
STP HRGMv2_0171_6 HRGMv2_0171_6_60 68680 69210 - Fer4 | Fer4
TC HRGMv2_0171_6 HRGMv2_0171_6_61 69258 70343 - 3.D.1.5.1
TC HRGMv2_0171_6 HRGMv2_0171_6_62 70381 71952 - 3.D.1.5.1
TC HRGMv2_0171_6 HRGMv2_0171_6_63 71974 72699 - 3.D.1.6.1
TC HRGMv2_0171_6 HRGMv2_0171_6_64 72690 73040 - 3.D.1.8.1
Gene ID: HRGMv2_0171_6_48
Type: CAZyme
Location: 52340 - 53824 (+)
Gene ID: HRGMv2_0171_6_49
Type: CAZyme
Location: 53844 - 54500 (+)
Gene ID: HRGMv2_0171_6_50
Type: CAZyme
Location: 54525 - 56036 (+)
Gene ID: HRGMv2_0171_6_51
Type: pfam
Location: 56520 - 57968 (-)
Gene ID: HRGMv2_0171_6_52
Type: pfam
Location: 57975 - 61439 (-)
Gene ID: HRGMv2_0171_6_53
Type: CAZyme
Location: 61476 - 62228 (-)
Gene ID: HRGMv2_0171_6_54
Type:
Location: 62444 - 62812 (+)
Gene ID: HRGMv2_0171_6_55
Type: TC
Location: 62856 - 64337 (-)
Gene ID: HRGMv2_0171_6_56
Type: TC
Location: 64372 - 65874 (-)
Gene ID: HRGMv2_0171_6_57
Type: TC
Location: 65887 - 67836 (-)
Gene ID: HRGMv2_0171_6_58
Type: TC
Location: 67843 - 68154 (-)
Gene ID: HRGMv2_0171_6_59
Type: TC
Location: 68151 - 68672 (-)
Gene ID: HRGMv2_0171_6_60
Type: STP
Location: 68680 - 69210 (-)
Gene ID: HRGMv2_0171_6_61
Type: TC
Location: 69258 - 70343 (-)
Gene ID: HRGMv2_0171_6_62
Type: TC
Location: 70381 - 71952 (-)
Gene ID: HRGMv2_0171_6_63
Type: TC
Location: 71974 - 72699 (-)
Gene ID: HRGMv2_0171_6_64
Type: TC
Location: 72690 - 73040 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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