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Cluster: HRGMv2_0171_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0171_5 HRGMv2_0171_5_39 42966 45002 + GH25
pfam HRGMv2_0171_5 HRGMv2_0171_5_40 45099 45836 + DUF2807 | DUF4097
pfam HRGMv2_0171_5 HRGMv2_0171_5_41 45907 46743 - PAP2_3
TC HRGMv2_0171_5 HRGMv2_0171_5_42 46750 47406 - 4.F.1.3.2
pfam HRGMv2_0171_5 HRGMv2_0171_5_43 47411 47824 - GtrA_DPMS_TM
pfam HRGMv2_0171_5 HRGMv2_0171_5_44 47821 48351 - PgpA
TC HRGMv2_0171_5 HRGMv2_0171_5_45 48422 50980 + 1.B.14.6.14
Gene ID: HRGMv2_0171_5_39
Type: CAZyme
Location: 42966 - 45002 (+)
Gene ID: HRGMv2_0171_5_40
Type: pfam
Location: 45099 - 45836 (+)
Gene ID: HRGMv2_0171_5_41
Type: pfam
Location: 45907 - 46743 (-)
Gene ID: HRGMv2_0171_5_42
Type: TC
Location: 46750 - 47406 (-)
Gene ID: HRGMv2_0171_5_43
Type: pfam
Location: 47411 - 47824 (-)
Gene ID: HRGMv2_0171_5_44
Type: pfam
Location: 47821 - 48351 (-)
Gene ID: HRGMv2_0171_5_45
Type: TC
Location: 48422 - 50980 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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