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Cluster: HRGMv2_0170_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0170_21 HRGMv2_0170_21_21 24923 26869 - GH32
NULL(UNKNOWN) HRGMv2_0170_21 HRGMv2_0170_21_22 26901 29204 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0170_21 HRGMv2_0170_21_23 29560 30774 + 2.A.1.7.17
STP HRGMv2_0170_21 HRGMv2_0170_21_24 30794 31684 + PfkB
peptidase HRGMv2_0170_21 HRGMv2_0170_21_25 32308 35118 - M16.UPB
TC HRGMv2_0170_21 HRGMv2_0170_21_26 35255 36805 - 3.A.11.1.3
pfam HRGMv2_0170_21 HRGMv2_0170_21_27 36828 37769 - Phage_integrase | Phage_int_SAM_1
CAZyme HRGMv2_0170_21 HRGMv2_0170_21_28 37904 38956 - GT9
Gene ID: HRGMv2_0170_21_21
Type: CAZyme
Location: 24923 - 26869 (-)
Gene ID: HRGMv2_0170_21_22
Type:
Location: 26901 - 29204 (-)
Gene ID: HRGMv2_0170_21_23
Type: TC
Location: 29560 - 30774 (+)
Gene ID: HRGMv2_0170_21_24
Type: STP
Location: 30794 - 31684 (+)
Gene ID: HRGMv2_0170_21_25
Type: peptidase
Location: 32308 - 35118 (-)
Gene ID: HRGMv2_0170_21_26
Type: TC
Location: 35255 - 36805 (-)
Gene ID: HRGMv2_0170_21_27
Type: pfam
Location: 36828 - 37769 (-)
Gene ID: HRGMv2_0170_21_28
Type: CAZyme
Location: 37904 - 38956 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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