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Cluster: HRGMv2_0168_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0168_7 HRGMv2_0168_7_46 51668 51940 + 2.A.123.2.2
STP HRGMv2_0168_7 HRGMv2_0168_7_47 51961 53139 + Aminotran_1_2
pfam HRGMv2_0168_7 HRGMv2_0168_7_48 53648 55057 + FAD_binding_2 | FAD_oxidored
CAZyme HRGMv2_0168_7 HRGMv2_0168_7_49 55215 58004 - CBM67 | GH78
CAZyme HRGMv2_0168_7 HRGMv2_0168_7_50 58348 60168 - GH2
CAZyme HRGMv2_0168_7 HRGMv2_0168_7_51 60431 62704 + GT20
CAZyme HRGMv2_0168_7 HRGMv2_0168_7_52 62694 64487 + GH15
Gene ID: HRGMv2_0168_7_46
Type: TC
Location: 51668 - 51940 (+)
Gene ID: HRGMv2_0168_7_47
Type: STP
Location: 51961 - 53139 (+)
Gene ID: HRGMv2_0168_7_48
Type: pfam
Location: 53648 - 55057 (+)
Gene ID: HRGMv2_0168_7_49
Type: CAZyme
Location: 55215 - 58004 (-)
Gene ID: HRGMv2_0168_7_50
Type: CAZyme
Location: 58348 - 60168 (-)
Gene ID: HRGMv2_0168_7_51
Type: CAZyme
Location: 60431 - 62704 (+)
Gene ID: HRGMv2_0168_7_52
Type: CAZyme
Location: 62694 - 64487 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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