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Cluster: HRGMv2_0168_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0168_15 HRGMv2_0168_15_8 7998 9482 - 8.A.46.1.4
TC HRGMv2_0168_15 HRGMv2_0168_15_9 9614 12568 - 1.B.14.6.1
CAZyme HRGMv2_0168_15 HRGMv2_0168_15_10 12581 13921 - GH37
CAZyme HRGMv2_0168_15 HRGMv2_0168_15_11 13934 15091 - GH26
CAZyme HRGMv2_0168_15 HRGMv2_0168_15_12 15118 16221 - GH26
TF HRGMv2_0168_15 HRGMv2_0168_15_13 16248 17141 - HTH_AraC
pfam HRGMv2_0168_15 HRGMv2_0168_15_14 17161 18366 - GlcNAc_2-epim
TC HRGMv2_0168_15 HRGMv2_0168_15_15 18366 19808 - 2.A.2.3.5
CAZyme HRGMv2_0168_15 HRGMv2_0168_15_16 19805 20995 - GH130_1
CAZyme HRGMv2_0168_15 HRGMv2_0168_15_17 21022 23031 - GH97
Gene ID: HRGMv2_0168_15_8
Type: TC
Location: 7998 - 9482 (-)
Gene ID: HRGMv2_0168_15_9
Type: TC
Location: 9614 - 12568 (-)
Gene ID: HRGMv2_0168_15_10
Type: CAZyme
Location: 12581 - 13921 (-)
Gene ID: HRGMv2_0168_15_11
Type: CAZyme
Location: 13934 - 15091 (-)
Gene ID: HRGMv2_0168_15_12
Type: CAZyme
Location: 15118 - 16221 (-)
Gene ID: HRGMv2_0168_15_13
Type: TF
Location: 16248 - 17141 (-)
Gene ID: HRGMv2_0168_15_14
Type: pfam
Location: 17161 - 18366 (-)
Gene ID: HRGMv2_0168_15_15
Type: TC
Location: 18366 - 19808 (-)
Gene ID: HRGMv2_0168_15_16
Type: CAZyme
Location: 19805 - 20995 (-)
Gene ID: HRGMv2_0168_15_17
Type: CAZyme
Location: 21022 - 23031 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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