Cluster: HRGMv2_0168_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0168
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0168_11 | HRGMv2_0168_11_7 | 7747 | 8289 | - | 9.B.124.1.3 |
| TC | HRGMv2_0168_11 | HRGMv2_0168_11_8 | 8302 | 8910 | - | 9.B.124.1.1 |
| TC | HRGMv2_0168_11 | HRGMv2_0168_11_9 | 9265 | 10797 | - | 2.A.17.1.6 |
| NULL(UNKNOWN) | HRGMv2_0168_11 | HRGMv2_0168_11_10 | 11234 | 11596 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0168_11 | HRGMv2_0168_11_11 | 11782 | 13809 | + | GH13_8 |
Gene ID: HRGMv2_0168_11_7
Type: TC
Location: 7747 - 8289 (-)
Type: TC
Location: 7747 - 8289 (-)
Gene ID: HRGMv2_0168_11_8
Type: TC
Location: 8302 - 8910 (-)
Type: TC
Location: 8302 - 8910 (-)
Gene ID: HRGMv2_0168_11_9
Type: TC
Location: 9265 - 10797 (-)
Type: TC
Location: 9265 - 10797 (-)
Gene ID: HRGMv2_0168_11_10
Type:
Location: 11234 - 11596 (+)
Type:
Location: 11234 - 11596 (+)
Gene ID: HRGMv2_0168_11_11
Type: CAZyme
Location: 11782 - 13809 (+)
Type: CAZyme
Location: 11782 - 13809 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes communis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.