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Cluster: HRGMv2_0164_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0164_50 HRGMv2_0164_50_2 564 2915 + 8.A.3.3.4
NULL(UNKNOWN) HRGMv2_0164_50 HRGMv2_0164_50_3 2950 4263 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0164_50 HRGMv2_0164_50_4 4295 5953 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0164_50 HRGMv2_0164_50_5 6022 7221 + GT4
pfam HRGMv2_0164_50 HRGMv2_0164_50_6 7337 8437 - MMR_HSR1 | FeoB_N | YchF-GTPase_C
CAZyme HRGMv2_0164_50 HRGMv2_0164_50_7 8670 10505 - GH13_46
CAZyme HRGMv2_0164_50 HRGMv2_0164_50_8 10572 12491 - GH13_14
CAZyme HRGMv2_0164_50 HRGMv2_0164_50_9 12589 15276 - GH77
TC HRGMv2_0164_50 HRGMv2_0164_50_10 15533 16285 - 3.D.10.1.5
TC HRGMv2_0164_50 HRGMv2_0164_50_11 16366 18375 - 3.D.10.1.5
Gene ID: HRGMv2_0164_50_2
Type: TC
Location: 564 - 2915 (+)
Gene ID: HRGMv2_0164_50_3
Type:
Location: 2950 - 4263 (+)
Gene ID: HRGMv2_0164_50_4
Type:
Location: 4295 - 5953 (+)
Gene ID: HRGMv2_0164_50_5
Type: CAZyme
Location: 6022 - 7221 (+)
Gene ID: HRGMv2_0164_50_6
Type: pfam
Location: 7337 - 8437 (-)
Gene ID: HRGMv2_0164_50_7
Type: CAZyme
Location: 8670 - 10505 (-)
Gene ID: HRGMv2_0164_50_8
Type: CAZyme
Location: 10572 - 12491 (-)
Gene ID: HRGMv2_0164_50_9
Type: CAZyme
Location: 12589 - 15276 (-)
Gene ID: HRGMv2_0164_50_10
Type: TC
Location: 15533 - 16285 (-)
Gene ID: HRGMv2_0164_50_11
Type: TC
Location: 16366 - 18375 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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