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Cluster: HRGMv2_0162_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0162_4 HRGMv2_0162_4_81 94716 95765 + GT2
CAZyme HRGMv2_0162_4 HRGMv2_0162_4_82 95775 96611 + GT2
CAZyme HRGMv2_0162_4 HRGMv2_0162_4_83 96637 97677 + GT4
pfam HRGMv2_0162_4 HRGMv2_0162_4_84 97768 99033 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_0162_4 HRGMv2_0162_4_85 99156 100073 + GT2
pfam HRGMv2_0162_4 HRGMv2_0162_4_86 100079 101293 + Aminotran_1_2 | DegT_DnrJ_EryC1
TC HRGMv2_0162_4 HRGMv2_0162_4_87 101308 101895 + 9.B.18.1.3
TC HRGMv2_0162_4 HRGMv2_0162_4_88 101977 103905 + 9.B.18.2.1
pfam HRGMv2_0162_4 HRGMv2_0162_4_89 104278 104715 - Lipocalin_8
pfam HRGMv2_0162_4 HRGMv2_0162_4_90 104860 106452 - Caps_assemb_Wzi
TC HRGMv2_0162_4 HRGMv2_0162_4_91 106627 107493 + 1.A.30.2.9
Gene ID: HRGMv2_0162_4_81
Type: CAZyme
Location: 94716 - 95765 (+)
Gene ID: HRGMv2_0162_4_82
Type: CAZyme
Location: 95775 - 96611 (+)
Gene ID: HRGMv2_0162_4_83
Type: CAZyme
Location: 96637 - 97677 (+)
Gene ID: HRGMv2_0162_4_84
Type: pfam
Location: 97768 - 99033 (+)
Gene ID: HRGMv2_0162_4_85
Type: CAZyme
Location: 99156 - 100073 (+)
Gene ID: HRGMv2_0162_4_86
Type: pfam
Location: 100079 - 101293 (+)
Gene ID: HRGMv2_0162_4_87
Type: TC
Location: 101308 - 101895 (+)
Gene ID: HRGMv2_0162_4_88
Type: TC
Location: 101977 - 103905 (+)
Gene ID: HRGMv2_0162_4_89
Type: pfam
Location: 104278 - 104715 (-)
Gene ID: HRGMv2_0162_4_90
Type: pfam
Location: 104860 - 106452 (-)
Gene ID: HRGMv2_0162_4_91
Type: TC
Location: 106627 - 107493 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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