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Cluster: HRGMv2_0162_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0162_45 HRGMv2_0162_45_7 4486 5709 + GT4
pfam HRGMv2_0162_45 HRGMv2_0162_45_8 5929 6975 + DUF2813 | AAA_15 | AAA_21 | AAA_23
pfam HRGMv2_0162_45 HRGMv2_0162_45_9 6977 7597 + DUF3226
CAZyme HRGMv2_0162_45 HRGMv2_0162_45_10 7641 8471 + GT26
NULL(UNKNOWN) HRGMv2_0162_45 HRGMv2_0162_45_11 8656 8859 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0162_45 HRGMv2_0162_45_12 9028 11286 - GH3
pfam HRGMv2_0162_45 HRGMv2_0162_45_13 11389 13134 - SusD_RagB
TC HRGMv2_0162_45 HRGMv2_0162_45_14 13151 16135 - 1.B.14.6.1
Gene ID: HRGMv2_0162_45_7
Type: CAZyme
Location: 4486 - 5709 (+)
Gene ID: HRGMv2_0162_45_8
Type: pfam
Location: 5929 - 6975 (+)
Gene ID: HRGMv2_0162_45_9
Type: pfam
Location: 6977 - 7597 (+)
Gene ID: HRGMv2_0162_45_10
Type: CAZyme
Location: 7641 - 8471 (+)
Gene ID: HRGMv2_0162_45_11
Type:
Location: 8656 - 8859 (+)
Gene ID: HRGMv2_0162_45_12
Type: CAZyme
Location: 9028 - 11286 (-)
Gene ID: HRGMv2_0162_45_13
Type: pfam
Location: 11389 - 13134 (-)
Gene ID: HRGMv2_0162_45_14
Type: TC
Location: 13151 - 16135 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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