Cluster: HRGMv2_0162_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0162
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0162_2 | HRGMv2_0162_2_39 | 55113 | 56255 | + | GT19 |
| peptidase | HRGMv2_0162_2 | HRGMv2_0162_2_40 | 56819 | 57772 | - | S09.B04 |
| CAZyme | HRGMv2_0162_2 | HRGMv2_0162_2_41 | 57792 | 58448 | - | CE3 |
| pfam | HRGMv2_0162_2 | HRGMv2_0162_2_42 | 58757 | 59683 | + | CorA |
| pfam | HRGMv2_0162_2 | HRGMv2_0162_2_43 | 59831 | 61627 | + | DUF349 | DUF349 | DUF349 | DUF349 | DUF349 |
| TC | HRGMv2_0162_2 | HRGMv2_0162_2_44 | 61831 | 63072 | - | 2.A.23.2.12 |
Gene ID: HRGMv2_0162_2_39
Type: CAZyme
Location: 55113 - 56255 (+)
Type: CAZyme
Location: 55113 - 56255 (+)
Gene ID: HRGMv2_0162_2_40
Type: peptidase
Location: 56819 - 57772 (-)
Type: peptidase
Location: 56819 - 57772 (-)
Gene ID: HRGMv2_0162_2_41
Type: CAZyme
Location: 57792 - 58448 (-)
Type: CAZyme
Location: 57792 - 58448 (-)
Gene ID: HRGMv2_0162_2_42
Type: pfam
Location: 58757 - 59683 (+)
Type: pfam
Location: 58757 - 59683 (+)
Gene ID: HRGMv2_0162_2_43
Type: pfam
Location: 59831 - 61627 (+)
Type: pfam
Location: 59831 - 61627 (+)
Gene ID: HRGMv2_0162_2_44
Type: TC
Location: 61831 - 63072 (-)
Type: TC
Location: 61831 - 63072 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000434975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.