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Cluster: HRGMv2_0162_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0162_19 HRGMv2_0162_19_32 35672 37045 + 2.A.1.1.3
STP HRGMv2_0162_19 HRGMv2_0162_19_33 37070 40360 + TPR_2
CAZyme HRGMv2_0162_19 HRGMv2_0162_19_34 40396 43134 + GH2
CAZyme HRGMv2_0162_19 HRGMv2_0162_19_35 43319 46471 - GH2
CAZyme HRGMv2_0162_19 HRGMv2_0162_19_36 46595 49120 - GH89
TC HRGMv2_0162_19 HRGMv2_0162_19_37 49149 50279 - 9.B.97.1.2
CAZyme HRGMv2_0162_19 HRGMv2_0162_19_38 50392 52653 - GH36
CAZyme HRGMv2_0162_19 HRGMv2_0162_19_39 52686 54986 - GH95
Gene ID: HRGMv2_0162_19_32
Type: TC
Location: 35672 - 37045 (+)
Gene ID: HRGMv2_0162_19_33
Type: STP
Location: 37070 - 40360 (+)
Gene ID: HRGMv2_0162_19_34
Type: CAZyme
Location: 40396 - 43134 (+)
Gene ID: HRGMv2_0162_19_35
Type: CAZyme
Location: 43319 - 46471 (-)
Gene ID: HRGMv2_0162_19_36
Type: CAZyme
Location: 46595 - 49120 (-)
Gene ID: HRGMv2_0162_19_37
Type: TC
Location: 49149 - 50279 (-)
Gene ID: HRGMv2_0162_19_38
Type: CAZyme
Location: 50392 - 52653 (-)
Gene ID: HRGMv2_0162_19_39
Type: CAZyme
Location: 52686 - 54986 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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