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Cluster: HRGMv2_0162_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0162_2 HRGMv2_0162_2_24 35934 36479 + 2.A.51.1.6
TC HRGMv2_0162_2 HRGMv2_0162_2_25 36481 37056 + 2.A.51.1.6
peptidase HRGMv2_0162_2 HRGMv2_0162_2_26 37116 38153 - M28.UPW
pfam HRGMv2_0162_2 HRGMv2_0162_2_27 38319 39836 + Phosphodiest | Metalloenzyme | iPGM_N
TC HRGMv2_0162_2 HRGMv2_0162_2_28 40124 40702 - 9.B.18.1.3
pfam HRGMv2_0162_2 HRGMv2_0162_2_29 40980 43598 - tRNA-synt_2c | DHHA1 | tRNA_SAD
TF HRGMv2_0162_2 HRGMv2_0162_2_30 43698 44045 + MerR
CAZyme HRGMv2_0162_2 HRGMv2_0162_2_31 44385 46568 + GH20
pfam HRGMv2_0162_2 HRGMv2_0162_2_32 46804 47823 + PDDEXK_2
STP HRGMv2_0162_2 HRGMv2_0162_2_33 47926 50199 - HD
CAZyme HRGMv2_0162_2 HRGMv2_0162_2_34 50268 51596 - GH23
Gene ID: HRGMv2_0162_2_24
Type: TC
Location: 35934 - 36479 (+)
Gene ID: HRGMv2_0162_2_25
Type: TC
Location: 36481 - 37056 (+)
Gene ID: HRGMv2_0162_2_26
Type: peptidase
Location: 37116 - 38153 (-)
Gene ID: HRGMv2_0162_2_27
Type: pfam
Location: 38319 - 39836 (+)
Gene ID: HRGMv2_0162_2_28
Type: TC
Location: 40124 - 40702 (-)
Gene ID: HRGMv2_0162_2_29
Type: pfam
Location: 40980 - 43598 (-)
Gene ID: HRGMv2_0162_2_30
Type: TF
Location: 43698 - 44045 (+)
Gene ID: HRGMv2_0162_2_31
Type: CAZyme
Location: 44385 - 46568 (+)
Gene ID: HRGMv2_0162_2_32
Type: pfam
Location: 46804 - 47823 (+)
Gene ID: HRGMv2_0162_2_33
Type: STP
Location: 47926 - 50199 (-)
Gene ID: HRGMv2_0162_2_34
Type: CAZyme
Location: 50268 - 51596 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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