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Cluster: HRGMv2_0162_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0162_15 HRGMv2_0162_15_35 45115 46803 - 2.A.81.1.2
pfam HRGMv2_0162_15 HRGMv2_0162_15_36 47125 48069 + EamA | EamA
TC HRGMv2_0162_15 HRGMv2_0162_15_37 48220 48939 + 3.A.1.122.14
TC HRGMv2_0162_15 HRGMv2_0162_15_38 48946 50208 + 3.A.1.122.2
TC HRGMv2_0162_15 HRGMv2_0162_15_39 50222 51469 + 3.A.1.122.1
pfam HRGMv2_0162_15 HRGMv2_0162_15_40 51523 52635 + HlyD_3 | HlyD_D23
NULL(UNKNOWN) HRGMv2_0162_15 HRGMv2_0162_15_41 52806 53465 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0162_15 HRGMv2_0162_15_42 53517 57197 + GH2
pfam HRGMv2_0162_15 HRGMv2_0162_15_43 58571 59113 - Ferritin | Rubrerythrin | RUBY_RBDX
CAZyme HRGMv2_0162_15 HRGMv2_0162_15_44 59198 60316 - GT4
CAZyme HRGMv2_0162_15 HRGMv2_0162_15_45 60355 61389 - GT2
Gene ID: HRGMv2_0162_15_35
Type: TC
Location: 45115 - 46803 (-)
Gene ID: HRGMv2_0162_15_36
Type: pfam
Location: 47125 - 48069 (+)
Gene ID: HRGMv2_0162_15_37
Type: TC
Location: 48220 - 48939 (+)
Gene ID: HRGMv2_0162_15_38
Type: TC
Location: 48946 - 50208 (+)
Gene ID: HRGMv2_0162_15_39
Type: TC
Location: 50222 - 51469 (+)
Gene ID: HRGMv2_0162_15_40
Type: pfam
Location: 51523 - 52635 (+)
Gene ID: HRGMv2_0162_15_41
Type:
Location: 52806 - 53465 (+)
Gene ID: HRGMv2_0162_15_42
Type: CAZyme
Location: 53517 - 57197 (+)
Gene ID: HRGMv2_0162_15_43
Type: pfam
Location: 58571 - 59113 (-)
Gene ID: HRGMv2_0162_15_44
Type: CAZyme
Location: 59198 - 60316 (-)
Gene ID: HRGMv2_0162_15_45
Type: CAZyme
Location: 60355 - 61389 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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