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Cluster: HRGMv2_0162_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0162_15 HRGMv2_0162_15_19 20022 21671 - 3.A.1.106.2
pfam HRGMv2_0162_15 HRGMv2_0162_15_20 21768 22652 - NAD_kinase | NAD_kinase_C
CAZyme HRGMv2_0162_15 HRGMv2_0162_15_21 22888 24162 + GT4
CAZyme HRGMv2_0162_15 HRGMv2_0162_15_22 24232 25014 + GT2
pfam HRGMv2_0162_15 HRGMv2_0162_15_23 25102 26196 + NTP_transferase | NTP_transf_3
CAZyme HRGMv2_0162_15 HRGMv2_0162_15_24 26313 28514 + CE20 | CE3
CAZyme HRGMv2_0162_15 HRGMv2_0162_15_25 28970 30508 + GH29
NULL(UNKNOWN) HRGMv2_0162_15 HRGMv2_0162_15_26 30548 32245 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0162_15 HRGMv2_0162_15_27 32324 35089 + GH16_3
Gene ID: HRGMv2_0162_15_19
Type: TC
Location: 20022 - 21671 (-)
Gene ID: HRGMv2_0162_15_20
Type: pfam
Location: 21768 - 22652 (-)
Gene ID: HRGMv2_0162_15_21
Type: CAZyme
Location: 22888 - 24162 (+)
Gene ID: HRGMv2_0162_15_22
Type: CAZyme
Location: 24232 - 25014 (+)
Gene ID: HRGMv2_0162_15_23
Type: pfam
Location: 25102 - 26196 (+)
Gene ID: HRGMv2_0162_15_24
Type: CAZyme
Location: 26313 - 28514 (+)
Gene ID: HRGMv2_0162_15_25
Type: CAZyme
Location: 28970 - 30508 (+)
Gene ID: HRGMv2_0162_15_26
Type:
Location: 30548 - 32245 (+)
Gene ID: HRGMv2_0162_15_27
Type: CAZyme
Location: 32324 - 35089 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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