Cluster: HRGMv2_0162_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0162
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0162_6 | HRGMv2_0162_6_46 | 54358 | 55977 | - | 3.A.1.121.4 |
| peptidase | HRGMv2_0162_6 | HRGMv2_0162_6_47 | 56223 | 56786 | - | C26.A32 |
| pfam | HRGMv2_0162_6 | HRGMv2_0162_6_48 | 56786 | 57661 | - | SOR_SNZ | ThiG |
| CAZyme | HRGMv2_0162_6 | HRGMv2_0162_6_49 | 57684 | 59819 | - | GH13_38 |
| pfam | HRGMv2_0162_6 | HRGMv2_0162_6_50 | 59825 | 60712 | - | Acyl_transf_1 |
| CAZyme | HRGMv2_0162_6 | HRGMv2_0162_6_51 | 60969 | 61901 | + | GH73 |
Gene ID: HRGMv2_0162_6_46
Type: TC
Location: 54358 - 55977 (-)
Type: TC
Location: 54358 - 55977 (-)
Gene ID: HRGMv2_0162_6_47
Type: peptidase
Location: 56223 - 56786 (-)
Type: peptidase
Location: 56223 - 56786 (-)
Gene ID: HRGMv2_0162_6_48
Type: pfam
Location: 56786 - 57661 (-)
Type: pfam
Location: 56786 - 57661 (-)
Gene ID: HRGMv2_0162_6_49
Type: CAZyme
Location: 57684 - 59819 (-)
Type: CAZyme
Location: 57684 - 59819 (-)
Gene ID: HRGMv2_0162_6_50
Type: pfam
Location: 59825 - 60712 (-)
Type: pfam
Location: 59825 - 60712 (-)
Gene ID: HRGMv2_0162_6_51
Type: CAZyme
Location: 60969 - 61901 (+)
Type: CAZyme
Location: 60969 - 61901 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000434975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.