Cluster: HRGMv2_0162_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0162
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0162_1 | HRGMv2_0162_1_20 | 18740 | 21088 | + | 1.B.14.15.2 |
| NULL(UNKNOWN) | HRGMv2_0162_1 | HRGMv2_0162_1_21 | 21197 | 21379 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0162_1 | HRGMv2_0162_1_22 | 21418 | 21651 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0162_1 | HRGMv2_0162_1_23 | 21549 | 23876 | - | GH20 |
Gene ID: HRGMv2_0162_1_20
Type: TC
Location: 18740 - 21088 (+)
Type: TC
Location: 18740 - 21088 (+)
Gene ID: HRGMv2_0162_1_21
Type:
Location: 21197 - 21379 (-)
Type:
Location: 21197 - 21379 (-)
Gene ID: HRGMv2_0162_1_22
Type:
Location: 21418 - 21651 (+)
Type:
Location: 21418 - 21651 (+)
Gene ID: HRGMv2_0162_1_23
Type: CAZyme
Location: 21549 - 23876 (-)
Type: CAZyme
Location: 21549 - 23876 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000434975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.