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Cluster: HRGMv2_0160_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0160_2 HRGMv2_0160_2_87 101462 102640 + 1.B.57.4.6
pfam HRGMv2_0160_2 HRGMv2_0160_2_88 102644 103126 + YgbB
pfam HRGMv2_0160_2 HRGMv2_0160_2_89 103432 104967 - Acetyltransf_1 | CN_hydrolase
CAZyme HRGMv2_0160_2 HRGMv2_0160_2_90 105023 106873 - GH13_46
CAZyme HRGMv2_0160_2 HRGMv2_0160_2_91 106875 108827 - GH13_14
CAZyme HRGMv2_0160_2 HRGMv2_0160_2_92 108854 111019 - GH97
CAZyme HRGMv2_0160_2 HRGMv2_0160_2_93 111050 113746 - GH77
Gene ID: HRGMv2_0160_2_87
Type: TC
Location: 101462 - 102640 (+)
Gene ID: HRGMv2_0160_2_88
Type: pfam
Location: 102644 - 103126 (+)
Gene ID: HRGMv2_0160_2_89
Type: pfam
Location: 103432 - 104967 (-)
Gene ID: HRGMv2_0160_2_90
Type: CAZyme
Location: 105023 - 106873 (-)
Gene ID: HRGMv2_0160_2_91
Type: CAZyme
Location: 106875 - 108827 (-)
Gene ID: HRGMv2_0160_2_92
Type: CAZyme
Location: 108854 - 111019 (-)
Gene ID: HRGMv2_0160_2_93
Type: CAZyme
Location: 111050 - 113746 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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