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Cluster: HRGMv2_0160_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0160_77 HRGMv2_0160_77_1 2 373 + 4.D.2.1.9
pfam HRGMv2_0160_77 HRGMv2_0160_77_2 357 1976 + DUF6056
CAZyme HRGMv2_0160_77 HRGMv2_0160_77_3 1973 2902 + GT2
pfam HRGMv2_0160_77 HRGMv2_0160_77_4 2904 4013 + PS_pyruv_trans
pfam HRGMv2_0160_77 HRGMv2_0160_77_5 4018 4623 + Acyl_transf_3
CAZyme HRGMv2_0160_77 HRGMv2_0160_77_6 5086 6057 + GT2
TC HRGMv2_0160_77 HRGMv2_0160_77_7 6098 7177 + 9.B.183.1.7
CAZyme HRGMv2_0160_77 HRGMv2_0160_77_8 7185 8318 + GT4
CAZyme HRGMv2_0160_77 HRGMv2_0160_77_9 8350 9303 + GT2
Gene ID: HRGMv2_0160_77_1
Type: TC
Location: 2 - 373 (+)
Gene ID: HRGMv2_0160_77_2
Type: pfam
Location: 357 - 1976 (+)
Gene ID: HRGMv2_0160_77_3
Type: CAZyme
Location: 1973 - 2902 (+)
Gene ID: HRGMv2_0160_77_4
Type: pfam
Location: 2904 - 4013 (+)
Gene ID: HRGMv2_0160_77_5
Type: pfam
Location: 4018 - 4623 (+)
Gene ID: HRGMv2_0160_77_6
Type: CAZyme
Location: 5086 - 6057 (+)
Gene ID: HRGMv2_0160_77_7
Type: TC
Location: 6098 - 7177 (+)
Gene ID: HRGMv2_0160_77_8
Type: CAZyme
Location: 7185 - 8318 (+)
Gene ID: HRGMv2_0160_77_9
Type: CAZyme
Location: 8350 - 9303 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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