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Cluster: HRGMv2_0160_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0160_1 HRGMv2_0160_1_73 89580 90569 - GT2
CAZyme HRGMv2_0160_1 HRGMv2_0160_1_74 90573 91544 - GT2
pfam HRGMv2_0160_1 HRGMv2_0160_1_75 91581 93095 + Polysacc_synt | Polysacc_synt_3
CAZyme HRGMv2_0160_1 HRGMv2_0160_1_76 93116 94111 + GT2
pfam HRGMv2_0160_1 HRGMv2_0160_1_77 94569 95960 + CitMHS
pfam HRGMv2_0160_1 HRGMv2_0160_1_78 95991 96968 + PFK
TC HRGMv2_0160_1 HRGMv2_0160_1_79 97256 98782 + 3.A.2.1.2
Gene ID: HRGMv2_0160_1_73
Type: CAZyme
Location: 89580 - 90569 (-)
Gene ID: HRGMv2_0160_1_74
Type: CAZyme
Location: 90573 - 91544 (-)
Gene ID: HRGMv2_0160_1_75
Type: pfam
Location: 91581 - 93095 (+)
Gene ID: HRGMv2_0160_1_76
Type: CAZyme
Location: 93116 - 94111 (+)
Gene ID: HRGMv2_0160_1_77
Type: pfam
Location: 94569 - 95960 (+)
Gene ID: HRGMv2_0160_1_78
Type: pfam
Location: 95991 - 96968 (+)
Gene ID: HRGMv2_0160_1_79
Type: TC
Location: 97256 - 98782 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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