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Cluster: HRGMv2_0160_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0160_24 HRGMv2_0160_24_18 23090 24394 - 2.A.66.1.4
pfam HRGMv2_0160_24 HRGMv2_0160_24_19 24510 26342 - BPL_LplA_LipB | Radical_SAM | Lip_prot_lig_C | LplA-B_cat
CAZyme HRGMv2_0160_24 HRGMv2_0160_24_20 26547 27848 - CE15
NULL(UNKNOWN) HRGMv2_0160_24 HRGMv2_0160_24_21 27854 28294 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0160_24 HRGMv2_0160_24_22 28470 28883 + RseC_MucC
TC HRGMv2_0160_24 HRGMv2_0160_24_23 28915 29829 + 3.D.6.1.3
TC HRGMv2_0160_24 HRGMv2_0160_24_24 29826 31235 + 3.D.6.1.2
TC HRGMv2_0160_24 HRGMv2_0160_24_25 31275 32279 + 3.D.6.1.2
TC HRGMv2_0160_24 HRGMv2_0160_24_26 32328 32888 + 3.D.6.1.2
TC HRGMv2_0160_24 HRGMv2_0160_24_27 32909 33505 + 3.D.6.1.2
TC HRGMv2_0160_24 HRGMv2_0160_24_28 33538 34140 + 3.D.6.1.2
Gene ID: HRGMv2_0160_24_18
Type: TC
Location: 23090 - 24394 (-)
Gene ID: HRGMv2_0160_24_19
Type: pfam
Location: 24510 - 26342 (-)
Gene ID: HRGMv2_0160_24_20
Type: CAZyme
Location: 26547 - 27848 (-)
Gene ID: HRGMv2_0160_24_21
Type:
Location: 27854 - 28294 (-)
Gene ID: HRGMv2_0160_24_22
Type: pfam
Location: 28470 - 28883 (+)
Gene ID: HRGMv2_0160_24_23
Type: TC
Location: 28915 - 29829 (+)
Gene ID: HRGMv2_0160_24_24
Type: TC
Location: 29826 - 31235 (+)
Gene ID: HRGMv2_0160_24_25
Type: TC
Location: 31275 - 32279 (+)
Gene ID: HRGMv2_0160_24_26
Type: TC
Location: 32328 - 32888 (+)
Gene ID: HRGMv2_0160_24_27
Type: TC
Location: 32909 - 33505 (+)
Gene ID: HRGMv2_0160_24_28
Type: TC
Location: 33538 - 34140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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